RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 H0YGN5 161 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 HARSP12081 509 aaKnown RBP14.11□□□□□ -0.15
CTNS-201ENST00000046640 KCNA2P16389 499 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 COMTP21964 271 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 ANXA13P27216 316 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 ACTR2P61160 394 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 KRT39Q6A163 491 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 LLGL2Q6P1M3 1020 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 SV2AQ7L0J3 742 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 CD302Q8IX05 232 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 CCDC13Q8IYE1 715 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 NFS1Q9Y697 457 aa14.11□□□□□ -0.15
CTNS-201ENST00000046640 NCANO14594 1321 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 ALCAMQ13740 583 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 CPLX4Q7Z7G2 160 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
CTNS-201ENST00000046640 CNPY4Q8N129 248 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 RAPGEF5Q92565 580 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 SELENOSQ9BQE4 189 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 VPS33BQ9H267 617 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 XPNPEP1Q9NQW7 623 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 KIF13BQ9NQT8 1826 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 MAPTP10636 758 aaKnown RBP14.1□□□□□ -0.15
CTNS-201ENST00000046640 WNT7BP56706 349 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 TGFB2P61812 414 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 GPC5P78333 572 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 CUL1Q13616 776 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 MYBPC2Q14324 1141 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 DAB2IPQ5VWQ8 1189 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 SPOPLQ6IQ16 392 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 C18orf8Q96DM3 657 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 ZBTB45Q96K62 511 aaPredicted RBP14.1□□□□□ -0.15
CTNS-201ENST00000046640 POLR3FQ9H1D9 316 aaPredicted RBP14.1□□□□□ -0.15
CTNS-201ENST00000046640 ANKEF1Q9NU02 776 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 CYP39A1Q9NYL5 469 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 GGA3Q9NZ52 723 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 SLC9A2Q9UBY0 812 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
CTNS-201ENST00000046640 UTP11Q9Y3A2 253 aaKnown RBP14.1□□□□□ -0.15
CTNS-201ENST00000046640 TCRBV7S2A1N4TA0A589 114 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 A6NNZ2 444 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 SHBGP04278 402 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 DSG3P32926 999 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 PLTPP55058 493 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 PPP2R2AP63151 447 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 TUBB8Q3ZCM7 444 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 UBAP2Q5T6F2 1119 aaKnown RBP14.09□□□□□ -0.15
CTNS-201ENST00000046640 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 MAP4K3Q8IVH8 894 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 ZNF653Q96CK0 615 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 NUP85Q9BW27 656 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 CCDC113Q9H0I3 377 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 NOCTQ9UK39 431 aaKnown RBP14.09□□□□□ -0.15
CTNS-201ENST00000046640 PNMA2Q9UL42 364 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 SNX24Q9Y343 169 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 FER1L6Q2WGJ9 1857 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 CES2O00748 559 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 CYP11B1P15538 503 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 SLCO1A2P46721 670 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 MFAP3P55082 362 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 FMO1Q01740 532 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 SCARA3Q6AZY7 606 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 FAM71AQ8IYT1 594 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 CCDC26Q8TAB7 109 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 HELQQ8TDG4 1101 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 ATP6V0A1Q93050 837 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 CYP26B1Q9NR63 512 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 PTPN22Q9Y2R2 807 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 DOCK5Q9H7D0 1870 aa14.09□□□□□ -0.15
CTNS-201ENST00000046640 SPOPO43791 374 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 CAND2O75155 1236 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 PSAPP07602 524 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 TNNI1P19237 187 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 GHRHRQ02643 423 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 CEP57Q86XR8 500 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 C12orf56Q8IXR9 622 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 ARFGAP2Q8N6H7 521 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 ZNF668Q96K58 619 aaPredicted RBP14.08□□□□□ -0.15
CTNS-201ENST00000046640 CALR3Q96L12 384 aaKnown RBP14.08□□□□□ -0.15
CTNS-201ENST00000046640 NT5C1BQ96P26 610 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 IWS1Q96ST2 819 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 AS3MTQ9HBK9 375 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 HAUS2Q9NVX0 235 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.15
CTNS-201ENST00000046640 LRRIQ4A6NIV6 560 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 CCDC188H7C350 402 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 STBD1O95210 358 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
CTNS-201ENST00000046640 DR1Q01658 176 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 ZBTB41Q5SVQ8 909 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 TMC3Q7Z5M5 1100 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms