RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Spdl1Q923A2 608 aa12.91□□□□□ -0.34
Herc4-208ENSMUST00000219577 FechP22315 420 aaKnown RBP12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 rp9P97762 213 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ccdc33Q3ULW6 985 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 AlcamQ61490 583 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Oca2Q62052 833 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Mcph1Q7TT79 822 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cep104Q80V31 926 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 A430089I19RikQ8C9W1 407 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Znrd1-asQ8R0E5 213 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Msantd4Q91YU3 345 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Slfn14V9GXG1 899 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gm10436L7N1Y3 520 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gm21962L7N280 338 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Slc3a2P10852 526 aaKnown RBP12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Fam193bQ3U2K0 892 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 WdpcpQ8C456 722 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Vmn1r199Q8R280 367 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pdxdc1Q99K01 787 aaKnown RBP12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Trap1Q9CQN1 706 aaKnown RBP12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 DffaO54786 331 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pkn1P70268 946 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Rit2P70425 217 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 VegfaQ00731 214 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pou6f1Q07916 301 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Sec23ipQ6NZC7 998 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 PhkbQ7TSH2 1085 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ipo5Q8BKC5 1097 aaKnown RBP12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 L3mbtl3Q8BLB7 883 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Fam20aQ8CID3 541 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Dennd1aQ8K382 1016 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Xpo6Q924Z6 1125 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ccdc182Q9D9C6 152 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cyth1Q9QX11 398 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Grk1Q9WVL4 564 aa12.9□□□□□ -0.34
Herc4-208ENSMUST00000219577 Irx1P81068 480 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Ogfod1Q3U0K8 545 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 TarsQ9D0R2 722 aaKnown RBP12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Cetn2Q9R1K9 172 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gm15448F6PZL4 682 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Vmn2r15L7N2A0 855 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 PrkceP16054 737 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Rnf113a2Q14B01 337 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 FancbQ5XJY6 703 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Vav2Q60992 868 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Zfp449Q8CB76 518 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gle1Q8R322 699 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Anapc4Q91W96 807 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Trim66Q924W6 1242 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Bco2Q99NF1 532 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Apba1B2RUJ5 842 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Vmn2r63E9Q0K5 859 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gm9268E9Q0M3 861 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Vmn2r62K7N712 859 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 CaluO35887 315 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Wnt7bP28047 349 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Rnaseh2bQ80ZV0 308 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Olfr1499Q8VG65 314 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Bag2Q91YN9 210 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Irx5Q9JKQ4 484 aa12.89□□□□□ -0.35
Herc4-208ENSMUST00000219577 Fam205aA2APU8 1308 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gm11985A0A1B0GS61 206 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Hsf3D0VYS2 492 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Alkbh1P0CB42 389 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Ccnd2P30280 289 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 AdssP46664 456 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Pde1bQ01065 535 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Mapk4Q6P5G0 583 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Ush1gQ80T11 461 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Tbc1d22bQ80VE5 505 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Olfr1502Q8VG66 316 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 IscuQ9D7P6 168 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Trpc3Q9QZC1 836 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Zscan4-ps3A0A1B0GRH6 506 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Zscan4-ps2A0A1C7CYU6 506 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Lmnb1P14733 588 aaKnown RBP12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 SftpbP50405 377 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Slc10a4Q3UEZ8 437 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Rmdn3Q3UJU9 470 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Fam92bQ3V2J0 292 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 LdhdQ7TNG8 484 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Ldlrap1Q8C142 308 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Iws1Q8C1D8 766 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Scrn2Q8VCA8 425 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Scyl1Q9EQC5 806 aaKnown RBP12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Stk11Q9WTK7 436 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Sgk1Q9WVC6 431 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gm5795E9PZN8 263 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Fmr1P35922 614 aaKnown RBP12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Frmd8Q3UFK8 466 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Capn13Q3UW68 665 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Atp2a1Q8R429 994 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Olfr390Q8VEZ7 311 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Rnf6Q9DBU5 667 aa12.88□□□□□ -0.35
Herc4-208ENSMUST00000219577 Cacna1sQ02789 1880 aa12.87□□□□□ -0.35
Herc4-208ENSMUST00000219577 Gpr161B2RPY5 545 aa12.87□□□□□ -0.35
Herc4-208ENSMUST00000219577 Casp14O89094 257 aa12.87□□□□□ -0.35
Herc4-208ENSMUST00000219577 Rnf216P58283 853 aa12.87□□□□□ -0.35
Herc4-208ENSMUST00000219577 Tmem120bQ3TA38 339 aa12.87□□□□□ -0.35
Herc4-208ENSMUST00000219577 Prom2Q3UUY6 835 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms