RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Desi2Q9D291 194 aa10.73□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Rab27aQ9ERI2 221 aa10.73□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Galk1Q9R0N0 392 aa10.73□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Cyp2b23E9Q593 491 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Ppm1aP49443 382 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Kcnf1Q7TSH7 493 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Cracr2bQ80ZJ8 394 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 D130040H23RikQ8BII3 405 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Ccdc15Q8C9M2 810 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Kat5Q8CHK4 513 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 C1qtnf12Q8R2Z0 308 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Tlcd1Q99JT6 247 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Akirin1Q99LF1 191 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Chst7Q9EP78 484 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Cacng4Q9JJV4 327 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Krt17Q9QWL7 433 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Dnajb2Q9QYI5 324 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Map2k5Q9WVS7 448 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Vstm4T1NXB5 319 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Ankrd16A2AS55 361 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Gm28042B7ZCM9 1014 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 AgtP11859 477 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Mcl1P97287 331 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Cnksr3Q8BMA3 555 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Fam78aQ8C552 283 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Setd3Q91WC0 594 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Mfap3lQ9D3X9 409 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Nol7Q9D7Z3 254 aaKnown RBP10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Foxe3Q9QY14 288 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Ccl26F8VQM2 93 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Art2aP17981 287 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Actn4P57780 912 aaKnown RBP10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Chp1P61022 195 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Mfsd14aP70187 490 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Hace1Q3U0D9 909 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Bag1Q60739 355 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Armcx2Q6A058 784 aaKnown RBP10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 FAM120AQ6A0A9 1112 aaKnown RBP10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Rnf139Q7TMV1 668 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Fgd5Q80UZ0 1219 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 HomezQ80W88 542 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 FtoQ8BGW1 502 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Prr11Q8BHE0 368 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Kcnv1Q8BZN2 503 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Adgrg3Q8R0T6 542 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Cpsf3Q9QXK7 684 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Gfpt2Q9Z2Z9 682 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 LctF8VPT3 1931 aa10.72□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Tmem265E9Q8G3 109 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 PtgisO35074 501 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Anks1aP59672 1150 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Hoxb13P70321 286 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Zcchc2Q69ZB8 1166 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 1700001K19RikQ80ZT1 219 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Rassf10Q8BL43 508 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Wdr11Q8K1X1 1223 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Mtmr6Q8VE11 617 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 TtpalQ9D3D0 343 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Trpm5Q9JJH7 1158 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 JmyQ9QXM1 983 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Vmn2r15L7N2A0 855 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 DtnbO70585 659 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Tpp1O89023 562 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Slc3a2P10852 526 aaKnown RBP10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Pbx1P41778 430 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Tbx3P70324 741 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Fads2p1Q0VAX3 487 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Sppl2bQ3TD49 578 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Esyt3Q5DTI8 891 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Xkr4Q5GH67 647 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Commd10Q8JZY2 202 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Psmd6Q99JI4 389 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Grtp1Q9D3N8 359 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Egfl7Q9QXT5 275 aa10.71□□□□□ -0.69
Ccdc38-201ENSMUST00000092215 Fpr-rs4A4FUQ5 323 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm17535J3KMR8 224 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rnpc3Q3UZ01 514 aaKnown RBP10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Epn1Q80VP1 575 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pan2Q8BGF7 1200 aaKnown RBP10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Agap1Q8BXK8 857 aaKnown RBP10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Q8C5S3 137 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Dmtf1Q8CE22 761 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Vwa1Q8R2Z5 415 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr1499Q8VG65 314 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Socs7Q8VHQ2 579 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Scnn1bQ9WU38 638 aa10.71□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Znf568E9PYI1 671 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr552E9Q545 317 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 ByslO54825 436 aaKnown RBP10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Myl6Q60605 151 aaKnown RBP10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 HarsQ61035 509 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mpp4Q6P7F1 635 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tas2r134Q7TQB0 298 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mei4Q8BRM6 389 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ttc26Q8BS45 554 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm5591Q8CDK1 855 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Adgrg2Q8CJ12 1009 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Unc93b1Q8VCW4 598 aa10.7□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr532Q8VGT4 309 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms