RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Zranb2Q9R020 330 aaKnown RBP10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 P01734 135 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Wnt7aP24383 349 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Runx2Q08775 607 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Trnp1Q80ZI1 223 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Usp38Q8BW70 1042 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Reep2Q8VCD6 254 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Pde6cQ91ZQ1 861 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Trim42Q9D2H5 723 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Ubxn11Q9D572 484 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Ttc13A0A1L1SSC7 844 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Fam129cD3YZB0 591 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Gm21962L7N280 338 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Pla2g6P97819 807 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Nfe2Q07279 373 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Cnga4Q3UW12 575 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Serpinb6dQ3UWK8 375 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Npdc1Q64322 332 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Impg2Q80XH2 1243 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Ccdc80Q8R2G6 949 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Rhobtb2Q91V93 728 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Hspbp1Q99P31 357 aaKnown RBP10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Igf2bp3Q9CPN8 579 aaKnown RBP10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 YwhabQ9CQV8 246 aaKnown RBP10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Rpap3Q9D706 660 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Orc1Q9Z1N2 840 aaKnown RBP10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Mtmr9Q9Z2D0 545 aa10.54□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Nedd1P33215 660 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Lrch2Q3UMG5 773 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Lrrc55Q3UY51 311 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Adgre1Q61549 931 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Pxylp1Q8BHA9 480 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Cpa5Q8R4H4 436 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Krt17Q9QWL7 433 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Gm28036V9GXJ1 658 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 MafgO54790 162 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Eif3dO70194 548 aaKnown RBP10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Ifnb1P01575 182 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Slc3a2P10852 526 aaKnown RBP10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Dynlt1P51807 113 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Ppp1r12cQ3UMT1 782 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Fam81aQ3UXZ6 364 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Sin3bQ62141 1098 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Adcy2Q80TL1 1090 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Lrrc24Q8BHA1 521 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Pnma1Q8C1C8 353 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Olfr390Q8VEZ7 311 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Uap1Q91YN5 522 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Strn3Q9ERG2 796 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Uchl3Q9JKB1 230 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Fmnl1Q9JL26 1094 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Tnfrsf10bQ9QZM4 381 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Gm5114W4VSN8 858 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Gm382B1AXN3 1250 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Gm5926E9PWJ8 236 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 B020004C17RikJ3QP07 232 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Nol4P60954 483 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Nuak1Q641K5 658 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Eif2aQ8BJW6 581 aaKnown RBP10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Champ1Q8K327 802 aaKnown RBP10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Scrn2Q8VCA8 425 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Kcnh7Q9ER47 1195 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Caln1Q9JJG7 219 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Dnajb7Q9QYI8 312 aa10.53□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Mpp3O88910 568 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Chrm1P12657 460 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 HalP35492 657 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Cyp2c39P56656 490 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Kansl1lQ5DTI6 991 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Pacsin1Q61644 441 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Prm3Q62100 101 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Adat2Q6P6J0 191 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Acot5Q6Q2Z6 421 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Uba6Q8C7R4 1053 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Shisa4Q8CA71 197 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Zkscan3Q91VW9 553 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Rtn3Q9ES97 964 aa10.52□□□□□ -0.72
Cpsf1-201ENSMUST00000071898 Atp8b5A3FIN4 1183 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 AurkbO70126 345 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Mboat4P0C7A3 435 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Gja8P28236 440 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Mark2Q05512 776 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Neurl1bQ0MW30 546 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Zfyve27Q3TXX3 415 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Luc7l3Q5SUF2 432 aaKnown RBP10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Pcsk7Q61139 770 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Spata24Q6P926 205 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 SrlQ7TQ48 910 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Klhl29Q80T74 875 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Ints2Q80UK8 1198 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 NkrfQ8BY02 690 aaKnown RBP10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Tbc1d10cQ8C9V1 444 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Usp27Q8CEG8 438 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Mettl13Q91YR5 698 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Ddx47Q9CWX9 455 aaKnown RBP10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 FignQ9ERZ6 759 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Ubr2Q6WKZ8 1755 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Krt36B1AQ75 473 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 JrklB2RRL2 523 aa10.52□□□□□ -0.73
Cpsf1-201ENSMUST00000071898 Tmigd3G3X8R9 209 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms