RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 RfkQ8CFV9 155 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Unc45bQ8CGY6 931 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 StrbpQ91WM1 672 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Baiap2l1Q9DBJ3 514 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tspan4Q9DCK3 238 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tnni1Q9WUZ5 187 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 4933402N22RikF7D1B3 190 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Apaf1O88879 1249 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Itih3Q61704 889 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zc3h11aQ6NZF1 792 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ttc7aQ8BGB2 858 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tmc7Q8C428 726 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Bend5Q8C6D4 421 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rab14Q91V41 215 aaKnown RBP9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kiaa2013Q91X21 634 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rassf1Q99MK9 340 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Usp29Q9ES63 869 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nr2e3Q9QXZ7 395 aa9.49□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rtl9Q32KG4 1339 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm5930D3Z257 264 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 DldO08749 509 aaKnown RBP9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Grk6O70293 576 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pa2g4P50580 394 aaKnown RBP9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Polr3bP59470 1133 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Btbd35f14Q1LZI5 498 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tmem247Q497K7 211 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q6GQV0 436 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Krt74Q6IFZ9 495 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Best2Q8BGM5 508 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 AagabQ8R2R3 316 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Srfbp1Q9CZ91 441 aaKnown RBP9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ift27Q9D0P8 186 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fbxw5Q9QXW2 573 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hmx1O70218 332 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pde9aO70628 534 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pou4f2Q63934 411 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Methig1Q76I26 264 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zer1Q80ZJ6 779 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gabra5Q8BHJ7 463 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tcf7l2Q924A0 459 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slx4ipQ9D7Y9 413 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sbno1Q689Z5 1390 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zbtb34A2ATY4 518 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm3383J3QQ59 259 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Grk4O70291 574 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Foxk1P42128 719 aaKnown RBP9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tbx4P70325 552 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kctd8Q50H33 476 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pou4f3Q63955 338 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 C2cd2lQ80X80 706 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Galnt6Q8C7U7 622 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 KlbQ99N32 1043 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cox16Q9CR63 106 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm3409A0A0G2JE67 319 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm5580A0A0N4SVP8 411 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ap3d1O54774 1199 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Igsf11P0C673 428 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Serpinc1P32261 465 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ppm1bP36993 390 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Garem1Q3UFT3 876 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hdac4Q6NZM9 1076 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sarm1Q6PDS3 724 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Psd4Q8BLR5 1005 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Q8BWQ6 963 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tgif2lx2Q8K5B9 231 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Eif3cQ8R1B4 911 aaKnown RBP9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hps3Q91VB4 1002 aa9.48□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm4450E9Q007 373 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 LipiF6YQT7 476 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ulk1O70405 1051 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Stat3P42227 770 aaKnown RBP9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hspa4lP48722 838 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Acot6Q32Q92 419 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Klra8Q60682 266 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Hsd3b4Q61767 373 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Trim27Q62158 513 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rbm14Q8C2Q3 669 aaKnown RBP9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Slc24a4Q8CGQ8 622 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Znf24Q91VN1 368 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rbm47Q91WT8 590 aaKnown RBP9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tpra1Q99MU1 369 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 TbcbQ9D1E6 244 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nol3Q9D1X0 220 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Capn9Q9D805 690 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 MeiocA2AG06 965 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 SpxD3Z752 116 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 StrnO55106 780 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 IppP28575 584 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm12185Q5NCB2 835 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ifit1Q64282 463 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Borcs6Q9D6W8 360 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lcmt1A0A0U1RNF2 332 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mettl11bB2RXM4 283 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Phb2O35129 299 aaKnown RBP9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Krt19P19001 403 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sat1P48026 171 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 NostrinQ6WKZ7 506 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kbtbd3Q8BHI4 607 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Trappc12Q8K2L8 797 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pcdhb21Q91V48 774 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms