RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Atp9bP98195 1146 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 ItgadQ3V0T4 1168 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Tfdp2Q64163 446 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Slc44a2Q8BY89 706 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Ttc33Q9D6K7 262 aa24.39■■□□□ 1.5
Sh3rf1-201ENSMUST00000034060 Q8BGD0 127 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Wdr35Q8BND3 1181 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 McamQ8R2Y2 648 aaKnown RBP24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Hars2Q99KK9 505 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm3173A6NAS3 172 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm3020E9Q3J7 150 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm2897K7N6T7 172 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Pde6bP23440 856 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Ccdc185Q3V118 621 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Tmem247Q497K7 211 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm3411Q8C7R2 150 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Mettl13Q91YR5 698 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Msi2Q920Q6 346 aaKnown RBP24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Cnbd2Q9D5U8 673 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Sgpp1Q9JI99 430 aa24.39■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Msr1P30204 458 aaKnown RBP24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Rab17P35292 214 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Oca2Q62052 833 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Akap7Q7TN79 314 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Smyd3Q9CWR2 428 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Arhgef16Q3U5C8 713 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Trim62Q80V85 475 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 WhrnQ80VW5 918 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Pold3Q9EQ28 462 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Fam129cD3YZB0 591 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm8897L7N294 181 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Eepd1Q3TGW2 569 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Wdr41Q3UDP0 460 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Myo1dQ5SYD0 1006 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Ddx3xQ62167 662 aaKnown RBP24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Dnajc5gQ8C632 165 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Castor1Q9CWQ8 331 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Ola1Q9CZ30 396 aaKnown RBP24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 CsadQ9DBE0 493 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Stmn3O70166 180 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Akap10O88845 662 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm4952Q5FW57 296 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Chit1Q9D7Q1 464 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Mms22lB1AUR6 1238 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Dnajb6O54946 365 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Pth1rP41593 591 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Lrrc1Q80VQ1 524 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Inpp5fQ8CDA1 1132 aa24.38■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Kiaa1551Q5DTW7 1521 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Wdr49A0A0N4SUK7 710 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Timm50Q9D880 353 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Cmtr1Q9DBC3 837 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Pi16Q9ET66 489 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 CiitaP79621 1155 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 A430089I19RikQ8C9W1 407 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 UvragQ8K245 698 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 WaslQ91YD9 501 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Batf3Q9D275 118 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Rad51ap2G3UW63 976 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Zfp846G3X996 541 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 E230025N22RikG5E8S3 482 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Ankrd34bQ3UUF8 508 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Vwa3aQ3UVV9 1148 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 FntaQ61239 377 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Drd5Q8BLD9 478 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Gm44G3UW88 330 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Anxa8O35640 327 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Eps8Q08509 821 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 FcgrtQ61559 365 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Sv2cQ69ZS6 727 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 CopaQ8CIE6 1224 aaKnown RBP24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 OafQ8QZR4 282 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Extl3Q9WVL6 918 aa24.37■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Setd1aE9PYH6 1716 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Sar1aP36536 198 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 IqcmQ149I8 489 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Pum3Q8BKS9 647 aaKnown RBP24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 NptxrQ99J85 493 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Nlrp1bA1Z198 1177 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Rexo5D3YW29 759 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Tfcp2l1Q3UNW5 479 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Ces1fQ91WU0 561 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 LrmdaQ9D9B4 229 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 CdylQ9WTK2 593 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Mgat1P27808 447 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Znf507Q6ZPY5 941 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Armc6Q8BNU0 468 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Abi1Q8CBW3 481 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Fgd3O88842 733 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Map4k1P70218 827 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Garnl3Q3V0G7 1038 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Als2clQ60I26 952 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Wbp4Q61048 376 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 SnrpaQ62189 287 aaKnown RBP24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Tspyl5Q69ZB3 406 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Dna2Q6ZQJ5 1062 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Wdr47Q8CGF6 920 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Swi5Q8K3D3 89 aa24.36■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Qtrt2B8ZXI1 415 aa24.35■■□□□ 1.49
Sh3rf1-201ENSMUST00000034060 Actr2P61161 394 aa24.35■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms