RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Ttc7bE9Q6P5 843 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Gm1661E9Q963 441 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Sema6bO54951 886 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Gja8P28236 440 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Gna14P30677 355 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Usp46P62069 366 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Stmn4P63042 189 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Vmn1r209Q5NC97 312 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 TbataQ7TSD4 393 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Lca5Q80ST9 704 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 C2cd2lQ80X80 706 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Trmt2aQ8BNV1 574 aaKnown RBP12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Nat14Q8BVG8 206 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Slc12a4Q9JIS8 1085 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Orc3Q9JK30 715 aaKnown RBP12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Krt36B1AQ75 473 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Fam71aB7XG49 585 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Gm10110D3Z5M2 615 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Tom1O88746 492 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Pik3caP42337 1068 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Etv6P97360 485 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Q14AM7 275 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Kcng4Q80XM3 506 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Znf76Q8BMU0 568 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Cep57Q8CEE0 500 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Btbd7Q8CFE5 1130 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Pop1Q8K205 1045 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Yipf1Q91VU1 306 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 4921524L21RikQ9D5T2 438 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Mzb1Q9D8I1 188 aa12.78□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Cyp2b9P12790 491 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Col6a1Q04857 1025 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 FaxcQ3UMF9 409 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Psg29Q3URN6 468 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Fam8a1Q3URQ4 399 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Ccdc84Q4VA36 332 aaKnown RBP12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Kcnt1Q6ZPR4 1224 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Tmc8Q7TN58 722 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Fbxo11Q7TPD1 930 aaKnown RBP12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Nucks1Q80XU3 234 aaKnown RBP12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Epc2Q8C0I4 808 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Ccdc134Q8C7V8 229 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Gpsm2Q8VDU0 679 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Dqx1Q924H9 718 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Uchl3Q9JKB1 230 aa12.77□□□□□ -0.36
Ercc4-201ENSMUST00000023206 Apol7bB1AQP7 369 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Ildr2B5TVM2 661 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Zc3h7aE9PWW6 970 aaKnown RBP12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Erich2E9Q1A6 463 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Dnmt3aO88508 908 aaKnown RBP12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Cnga4Q3UW12 575 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Apol7eQ3UZ24 369 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Grm6Q5NCH9 871 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Oxnad1Q8VE38 311 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Nmrk1Q91W63 195 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 MmadhcQ99LS1 296 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Nme5Q99MH5 211 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Prss23Q9D6X6 382 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 PpihQ9D868 188 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 FignQ9ERZ6 759 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Sfmbt1Q9JMD1 863 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Pck1Q9Z2V4 622 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Znf536Q8K083 1302 aa12.77□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Rap1gds1E9Q912 607 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Foxm1O08696 760 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 NumblO08919 604 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Aff1O88573 1216 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 HarsQ61035 509 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Tas2r134Q7TQB0 298 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 IarsQ8BU30 1262 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Slc13a1Q9JHI4 594 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 PnkpQ9JLV6 522 aaKnown RBP12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Ecel1Q9JMI0 775 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Cyp4f40G3UW81 524 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Zfp212G3X8R7 492 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Banf1O54962 89 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 CidebO70303 219 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Dnajc5P60904 198 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Xxylt1Q3U4G3 392 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Mier3Q3UHF3 551 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Otud6aQ6IE21 290 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Pip5kl1Q6U7H8 395 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 TufmQ8BFR5 452 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Gtpbp10Q8K013 366 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Unc5bQ8K1S3 945 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Acat1Q8QZT1 424 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Sumf1Q8R0F3 372 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Cpa5Q8R4H4 436 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Plcb4Q91UZ1 1175 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Slc5a5Q99PN0 618 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Ddah1Q9CWS0 285 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Htra2Q9JIY5 458 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Phf2Q9WTU0 1096 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Tekt5G5E8A8 557 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 PtenO08586 403 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Eepd1Q3TGW2 569 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Klhdc9Q3USL1 350 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Map3k7Q62073 579 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Mea1Q64327 174 aa12.76□□□□□ -0.37
Ercc4-201ENSMUST00000023206 Kat5Q8CHK4 513 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms