RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Gm3893E9Q1I1 302 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zfp266E9Q2S7 604 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Akap1O08715 857 aaKnown RBP12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nedd1P33215 660 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 VrtnQ3SYK4 740 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 KizQ3UXL4 695 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tab3Q571K4 716 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gstt2Q61133 244 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sestd1Q80UK0 696 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Eif2aQ8BJW6 581 aaKnown RBP12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 C130026I21RikQ8C898 291 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 NemfQ8CCP0 1064 aaKnown RBP12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Uba5Q8VE47 403 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mrps22Q9CXW2 359 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Htra2Q9JIY5 458 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Spata31d1aE9QA35 1336 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zfp984A2A7A2 547 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm8994E9PV04 411 aaKnown RBP12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Esr2O08537 530 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 MttpO08601 894 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 DtnbO70585 659 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 DnttP09838 530 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cav1P49817 178 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tbc1d10aP58802 500 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ttc39dQ0VF76 604 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ell2Q3UKU1 639 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Klrg2Q3UM83 387 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Stxbp5lQ5DQR4 1185 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Arl13bQ640N2 427 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Kiaa1328Q6NZK5 612 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Kcnk18Q6VV64 394 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 SrlQ7TQ48 910 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pramel6Q810Y9 485 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 SowahcQ8C0J6 512 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ubxn2aQ99KJ0 258 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ecel1Q9JMI0 775 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 PapolbQ9WVP6 641 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mzf1S4R1L6 814 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Astn1Q61137 1302 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Chd5A2A8L1 1946 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 B020011L13RikA0A087WQI7 412 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Krt90E9Q1Z0 538 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sstr3P30935 428 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ythdf1P59326 559 aaKnown RBP12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Bend4P86174 541 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Slc10a4Q3UEZ8 437 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Hbs1lQ69ZS7 682 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sec23ipQ6NZC7 998 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cpa1Q7TPZ8 419 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Bank1Q80VH0 783 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mageb18Q8BQR7 327 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Myl6bQ8CI43 207 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Slc14a2Q8R4T9 930 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 SmtnQ921U8 923 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Snf8Q9CZ28 258 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ccdc124Q9D8X2 217 aaKnown RBP12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gtf2ird1Q9JI57 1104 aaKnown RBP12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gbp2Q9Z0E6 589 aa12.86□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nme9A0A1L1SUL6 329 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mmrn2A6H6E2 943 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm3127E9Q9P5 263 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm3453K7N724 263 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam71e2L7N480 754 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Eno1P17182 434 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ripk2P58801 539 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rasgrf2P70392 1189 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Klra6Q60653 266 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 WaplQ65Z40 1200 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Orai3Q6P8G8 290 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ntrk3Q6VNS1 825 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Wnk4Q80UE6 1222 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ankfy1Q810B6 1169 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Trmt13Q8BYH3 481 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Lmo3Q8BZL8 145 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Proser2Q8C5R2 471 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zfp449Q8CB76 518 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 D630039A03RikQ8K0M7 236 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Stx18Q8VDS8 334 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam192aQ91WE2 254 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mtmr4Q91XS1 1190 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ttc1Q91Z38 292 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rfc4Q99J62 364 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 MlxiplQ99MZ3 864 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 4930519G04RikQ9CPT7 205 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ears2Q9CXJ1 523 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Subh2bvQ9D9Z7 123 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 NapaQ9DB05 295 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ndufa13Q9ERS2 144 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ropn1Q9ESG2 212 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Hyou1Q9JKR6 999 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Myl7Q9QVP4 175 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 NinQ61043 2035 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Vmn2r68L7N2B3 851 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sema4dO09126 861 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tal1P22091 329 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Crnkl1P63154 690 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 FerP70451 823 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Palb2Q3U0P1 1104 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm4952Q5FW57 296 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Atp4aQ64436 1033 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms