RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dna2Q6ZQJ5 1062 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Znf579Q80VM4 562 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm5622Q810Q0 167 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ddx18Q8K363 660 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trim31Q8R0K2 507 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rnf8Q8VC56 488 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rpa1Q8VEE4 623 aaKnown RBP9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pidd1Q9ERV7 915 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Acot3Q9QYR7 432 aa9.65□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm9992B2RWK3 458 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm3424L7N298 263 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm8246M0QWX9 263 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Alppl2P24823 529 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tlx1P43345 332 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Setd4P58467 439 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gcnt1Q09324 428 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Zbtb17Q60821 794 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 SnrpaQ62189 287 aaKnown RBP9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Unc93aQ710D3 458 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sgsm1Q8BPQ7 1093 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slc44a2Q8BY89 706 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Btbd6Q8K2J9 488 aa9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pdia6Q922R8 440 aaKnown RBP9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 H2afyQ9QZQ8 372 aaKnown RBP9.65□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 SynrgQ5SV85 1306 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kiaa0232Q80U59 1396 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm45261A0A1B0GSP6 197 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 FancfE9Q5Z5 343 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nck2O55033 380 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 RxrgP28705 463 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 UrosP51163 265 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kcnn2P58390 839 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 LbrQ3U9G9 626 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Znf827Q505G8 1078 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nqo1Q64669 274 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Krt73Q6NXH9 539 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgap15Q811M1 481 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kbtbd13Q8C828 458 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Wdr47Q8CGF6 920 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ago2Q8CJG0 860 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hacd3Q8K2C9 362 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 BsndQ8VIM4 307 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cd248Q91V98 765 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mrps9Q9D7N3 390 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trpv2Q9WTR1 756 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Krt16Q9Z2K1 469 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgef37A1IGU4 676 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tex28B1AYN9 409 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm10436L7N1Y3 520 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tlk2O55047 718 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Lins1Q3U1D0 764 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gpr162Q3UN16 588 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tmem247Q497K7 211 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cyp3a13Q64464 503 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim56Q80VI1 734 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ms4a5Q810P8 197 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Haus7Q8BKT8 364 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 SucoQ8C341 1250 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Swi5Q8K3D3 89 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mrpl50Q8VDT9 159 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfr1494Q8VGP8 315 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hars2Q99KK9 505 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 LactbQ9EP89 551 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rpf2Q9JJ80 306 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rnf123Q5XPI3 1314 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 A0A1Y7VP24 259 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rhox3fA2ANE1 215 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 C1dO35473 141 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hspa9P38647 679 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hsd17b4P51660 735 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Eif3eP60229 445 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cct7P80313 544 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tigd5Q499M4 642 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 FancbQ5XJY6 703 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nr1h4Q60641 488 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Adat2Q6P6J0 191 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam102aQ78T81 392 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mmgt1Q8K273 131 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Vmn1r213Q8R278 384 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ascc2Q91WR3 749 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim59Q922Y2 403 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cstf3Q99LI7 717 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Q9CR55 154 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ddx56Q9D0R4 546 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dcun1d1Q9QZ73 259 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nr1h3Q9Z0Y9 445 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 AF366264G3X9P9 502 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Psmd14O35593 310 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ms4a2P20490 235 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ccna2P51943 422 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ext2P70428 718 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ccdc127Q3TC33 260 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ccdc51Q3URS9 406 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgap44Q5SSM3 814 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fxr1Q61584 677 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hdac10Q6P3E7 666 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Moxd2Q7TT41 619 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pak5Q8C015 719 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Slc9b1Q8C0X2 565 aa9.64□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Galnt5Q8C102 930 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms