RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YMR187CQ03236 431 aa5.01□□□□□ -1.61
VPS1YKR001C PKR1Q03880 122 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C HRD3Q05787 833 aa5.01□□□□□ -1.61
VPS1YKR001C GAS2Q06135 555 aa5.01□□□□□ -1.61
VPS1YKR001C RDL1Q12305 139 aaKnown RBP5.01□□□□□ -1.61
VPS1YKR001C RIB3Q99258 208 aa5.01□□□□□ -1.61
VPS1YKR001C YBR085C-AO43137 85 aa5□□□□□ -1.61
VPS1YKR001C MCK1P21965 375 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C SEC22P22214 214 aa5□□□□□ -1.61
VPS1YKR001C STP22P25604 385 aa5□□□□□ -1.61
VPS1YKR001C TRR1P29509 319 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C ISC10P32645 267 aa5□□□□□ -1.61
VPS1YKR001C CBP4P37267 147 aa5□□□□□ -1.61
VPS1YKR001C IML3P38265 245 aa5□□□□□ -1.61
VPS1YKR001C END3P39013 349 aa5□□□□□ -1.61
VPS1YKR001C YFR057WP43625 151 aa5□□□□□ -1.61
VPS1YKR001C IRC18P47056 224 aa5□□□□□ -1.61
VPS1YKR001C PHO23P50947 330 aa5□□□□□ -1.61
VPS1YKR001C SLM2P53955 656 aa5□□□□□ -1.61
VPS1YKR001C SMX3P54999 86 aaPredicted RBP5□□□□□ -1.61
VPS1YKR001C NAM8Q00539 523 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C AIM34Q03673 198 aa5□□□□□ -1.61
VPS1YKR001C HOF1Q05080 669 aa5□□□□□ -1.61
VPS1YKR001C MRPL35Q06678 367 aa5□□□□□ -1.61
VPS1YKR001C UPC2Q12151 913 aa5□□□□□ -1.61
VPS1YKR001C TY1A-DR3Q12441 440 aa5□□□□□ -1.61
VPS1YKR001C GCN1P33892 2672 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C BAR1P12630 587 aa5□□□□□ -1.61
VPS1YKR001C PDA1P16387 420 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C FUN14P18411 198 aa5□□□□□ -1.61
VPS1YKR001C PRE9P23638 258 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C STE14P32584 239 aa5□□□□□ -1.61
VPS1YKR001C PRY2P36110 329 aa5□□□□□ -1.61
VPS1YKR001C UME6P39001 836 aa5□□□□□ -1.61
VPS1YKR001C YPS6P40583 537 aa5□□□□□ -1.61
VPS1YKR001C MNN5P46982 586 aa5□□□□□ -1.61
VPS1YKR001C CPR7P47103 393 aa5□□□□□ -1.61
VPS1YKR001C COQ5P49017 307 aa5□□□□□ -1.61
VPS1YKR001C MRH4P53166 561 aa5□□□□□ -1.61
VPS1YKR001C MKC7P53379 596 aa5□□□□□ -1.61
VPS1YKR001C YDR366CP87287 132 aa5□□□□□ -1.61
VPS1YKR001C NOC4Q06512 552 aaPredicted RBP5□□□□□ -1.61
VPS1YKR001C FDH1Q08911 376 aa5□□□□□ -1.61
VPS1YKR001C YPR1Q12458 312 aa5□□□□□ -1.61
VPS1YKR001C AIM45Q12480 344 aaKnown RBP5□□□□□ -1.61
VPS1YKR001C YKL183C-AQ3E765 70 aa5□□□□□ -1.61
VPS1YKR001C YCR075W-AQ3E830 75 aa5□□□□□ -1.61
VPS1YKR001C YKL033W-AQ86ZR7 236 aa5□□□□□ -1.61
VPS1YKR001C YBR126W-AQ8TGU7 68 aa5□□□□□ -1.61
VPS1YKR001C PRP8P33334 2413 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C CDC21P06785 304 aa4.99□□□□□ -1.61
VPS1YKR001C GCR1P07261 785 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-LR4P0C2I8 440 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C TY1A-DR6P0CX70 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-ER1P0CX71 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-LR2P0CX72 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-PLP0CX73 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-JR1P0CX74 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-LR3P0CX75 440 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-ML2P0CX76 440 aa4.99□□□□□ -1.61
VPS1YKR001C CPT1P17898 393 aa4.99□□□□□ -1.61
VPS1YKR001C ARO2P28777 376 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C SEC17P32602 292 aa4.99□□□□□ -1.61
VPS1YKR001C DCW1P36091 449 aa4.99□□□□□ -1.61
VPS1YKR001C GLR1P41921 483 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C ERJ5P43613 295 aaPredicted RBP4.99□□□□□ -1.61
VPS1YKR001C STE24P47154 453 aa4.99□□□□□ -1.61
VPS1YKR001C MNN10P50108 393 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C MRPL22P53881 309 aa4.99□□□□□ -1.61
VPS1YKR001C HXT15P54854 567 aa4.99□□□□□ -1.61
VPS1YKR001C APS2Q00381 147 aa4.99□□□□□ -1.61
VPS1YKR001C YPL062WQ02781 134 aa4.99□□□□□ -1.61
VPS1YKR001C CGI121Q03705 181 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C RNH202Q05635 350 aa4.99□□□□□ -1.61
VPS1YKR001C YLR446WQ06204 433 aa4.99□□□□□ -1.61
VPS1YKR001C ATG10Q07879 167 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-GR1Q12085 440 aa4.99□□□□□ -1.61
VPS1YKR001C DCP1Q12517 231 aaPredicted RBP4.99□□□□□ -1.61
VPS1YKR001C YLR099W-AQ3E798 87 aa4.99□□□□□ -1.61
VPS1YKR001C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C TY1A-OLQ92392 440 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C ELO2P25358 347 aa4.99□□□□□ -1.61
VPS1YKR001C RFA3P26755 122 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C NUP2P32499 720 aa4.99□□□□□ -1.61
VPS1YKR001C TRS65P32893 560 aa4.99□□□□□ -1.61
VPS1YKR001C SNU13P39990 126 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C TIF34P40217 347 aaKnown RBP4.99□□□□□ -1.61
VPS1YKR001C COA1P40452 197 aa4.99□□□□□ -1.61
VPS1YKR001C YIL060WP40519 144 aa4.99□□□□□ -1.61
VPS1YKR001C YHC3P47040 408 aa4.99□□□□□ -1.61
VPS1YKR001C TIM13P53299 105 aa4.99□□□□□ -1.61
VPS1YKR001C RSC9Q03124 581 aa4.99□□□□□ -1.61
VPS1YKR001C TMA23Q03525 211 aa4.99□□□□□ -1.61
VPS1YKR001C TDA1Q03533 586 aa4.99□□□□□ -1.61
VPS1YKR001C GOT1Q03554 138 aa4.99□□□□□ -1.61
VPS1YKR001C YMR206WQ03695 313 aa4.99□□□□□ -1.61
VPS1YKR001C SEN15Q04675 128 aa4.99□□□□□ -1.61
VPS1YKR001C BNA5Q05979 453 aa4.99□□□□□ -1.61
VPS1YKR001C YDR018CQ12185 396 aa4.99□□□□□ -1.61
VPS1YKR001C FRE8Q12209 686 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms