RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C FAA2P39518 744 aa4.88□□□□□ -1.63
RPT6YGL048C SHR5P41912 237 aa4.88□□□□□ -1.63
RPT6YGL048C TRS85P46944 698 aa4.88□□□□□ -1.63
RPT6YGL048C ECM27P47144 725 aa4.88□□□□□ -1.63
RPT6YGL048C YJR141WP47172 347 aaPredicted RBP4.88□□□□□ -1.63
RPT6YGL048C YGR066CP53242 292 aa4.88□□□□□ -1.63
RPT6YGL048C YIP3P53633 176 aa4.88□□□□□ -1.63
RPT6YGL048C YPL068CQ02749 293 aa4.88□□□□□ -1.63
RPT6YGL048C LGE1Q02796 332 aaKnown RBP4.88□□□□□ -1.63
RPT6YGL048C CGI121Q03705 181 aaKnown RBP4.88□□□□□ -1.63
RPT6YGL048C CAB5Q03941 241 aa4.88□□□□□ -1.63
RPT6YGL048C COX20Q04935 205 aa4.88□□□□□ -1.63
RPT6YGL048C RRG8Q06109 277 aa4.88□□□□□ -1.63
RPT6YGL048C MFG1Q07684 458 aa4.88□□□□□ -1.63
RPT6YGL048C PAM18Q07914 168 aa4.88□□□□□ -1.63
RPT6YGL048C FDH1Q08911 376 aa4.88□□□□□ -1.63
RPT6YGL048C PRP46Q12417 451 aaPredicted RBP4.88□□□□□ -1.63
RPT6YGL048C HTZ1Q12692 134 aaKnown RBP4.88□□□□□ -1.63
RPT6YGL048C SLH1P53327 1967 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C DFR1P07807 211 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
RPT6YGL048C SAR1P20606 190 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C IDH1P28834 360 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
RPT6YGL048C ITR2P30606 609 aa4.87□□□□□ -1.63
RPT6YGL048C ARP2P32381 391 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C RAD23P32628 398 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C EMP70P32802 667 aa4.87□□□□□ -1.63
RPT6YGL048C RIB1P38066 345 aa4.87□□□□□ -1.63
RPT6YGL048C ICS2P38284 255 aa4.87□□□□□ -1.63
RPT6YGL048C TDA11P38854 504 aa4.87□□□□□ -1.63
RPT6YGL048C MLH1P38920 769 aa4.87□□□□□ -1.63
RPT6YGL048C LYS12P40495 371 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C YIL067CP40514 678 aa4.87□□□□□ -1.63
RPT6YGL048C YGR201CP42936 225 aa4.87□□□□□ -1.63
RPT6YGL048C ECO1P43605 281 aa4.87□□□□□ -1.63
RPT6YGL048C IRC5P43610 853 aa4.87□□□□□ -1.63
RPT6YGL048C RPE1P46969 238 aa4.87□□□□□ -1.63
RPT6YGL048C RIB4P50861 169 aaPredicted RBP4.87□□□□□ -1.63
RPT6YGL048C YGL235WP53071 178 aa4.87□□□□□ -1.63
RPT6YGL048C BUD17P53727 317 aa4.87□□□□□ -1.63
RPT6YGL048C YLR460CP54007 376 aa4.87□□□□□ -1.63
RPT6YGL048C YPL080CQ02826 108 aa4.87□□□□□ -1.63
RPT6YGL048C PLP1Q04004 230 aa4.87□□□□□ -1.63
RPT6YGL048C PRS5Q12265 496 aaKnown RBP4.87□□□□□ -1.63
RPT6YGL048C DCP1Q12517 231 aaPredicted RBP4.87□□□□□ -1.63
RPT6YGL048C YJR112W-AQ3E743 109 aa4.87□□□□□ -1.63
RPT6YGL048C Q0144Q9ZZW2 109 aa4.87□□□□□ -1.63
RPT6YGL048C REP1P03871 373 aa4.86□□□□□ -1.63
RPT6YGL048C SAG1P20840 650 aa4.86□□□□□ -1.63
RPT6YGL048C NUP2P32499 720 aa4.86□□□□□ -1.63
RPT6YGL048C YBL010CP32788 280 aa4.86□□□□□ -1.63
RPT6YGL048C YPT7P32939 208 aa4.86□□□□□ -1.63
RPT6YGL048C PAD1P33751 242 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
RPT6YGL048C ROT2P38138 954 aa4.86□□□□□ -1.63
RPT6YGL048C HEK2P38199 381 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
RPT6YGL048C MIC12P38341 106 aa4.86□□□□□ -1.63
RPT6YGL048C FAD1P38913 306 aa4.86□□□□□ -1.63
RPT6YGL048C RGI1P40043 161 aaPredicted RBP4.86□□□□□ -1.63
RPT6YGL048C SNL1P40548 159 aa4.86□□□□□ -1.63
RPT6YGL048C SGN1P40561 250 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
RPT6YGL048C HXT9P40885 567 aa4.86□□□□□ -1.63
RPT6YGL048C CIN1P40987 1014 aa4.86□□□□□ -1.63
RPT6YGL048C PAC10P48363 199 aa4.86□□□□□ -1.63
RPT6YGL048C RPS12P48589 143 aaKnown RBP4.86□□□□□ -1.63
RPT6YGL048C YIP5P53108 310 aa4.86□□□□□ -1.63
RPT6YGL048C HXT11P54862 567 aa4.86□□□□□ -1.63
RPT6YGL048C PLB2Q03674 706 aa4.86□□□□□ -1.63
RPT6YGL048C YMR010WQ03687 405 aa4.86□□□□□ -1.63
RPT6YGL048C SEI1Q06058 285 aa4.86□□□□□ -1.63
RPT6YGL048C DXO1Q06349 442 aa4.86□□□□□ -1.63
RPT6YGL048C MRPL35Q06678 367 aa4.86□□□□□ -1.63
RPT6YGL048C YLR036CQ07986 203 aa4.86□□□□□ -1.63
RPT6YGL048C CRT10Q08226 957 aa4.86□□□□□ -1.63
RPT6YGL048C PSF1Q12488 208 aa4.86□□□□□ -1.63
RPT6YGL048C TAD3Q9URQ3 322 aa4.86□□□□□ -1.63
RPT6YGL048C HTB1P02293 131 aaKnown RBP4.85□□□□□ -1.63
RPT6YGL048C HTB2P02294 131 aa4.85□□□□□ -1.63
RPT6YGL048C SCEIP03882 235 aa4.85□□□□□ -1.63
RPT6YGL048C PHO2P07269 559 aa4.85□□□□□ -1.63
RPT6YGL048C RPS16AP0CX51 143 aaKnown RBP4.85□□□□□ -1.63
RPT6YGL048C RPS16BP0CX52 143 aaKnown RBP4.85□□□□□ -1.63
RPT6YGL048C ARF1P11076 181 aaKnown RBP4.85□□□□□ -1.63
RPT6YGL048C CCA1P21269 546 aa4.85□□□□□ -1.63
RPT6YGL048C ERG8P24521 451 aa4.85□□□□□ -1.63
RPT6YGL048C CSM1P25651 190 aa4.85□□□□□ -1.63
RPT6YGL048C PDB1P32473 366 aaKnown RBP4.85□□□□□ -1.63
RPT6YGL048C HSP150P32478 413 aa4.85□□□□□ -1.63
RPT6YGL048C MKK1P32490 508 aa4.85□□□□□ -1.63
RPT6YGL048C ECT1P33412 323 aa4.85□□□□□ -1.63
RPT6YGL048C IST2P38250 946 aa4.85□□□□□ -1.63
RPT6YGL048C FZO1P38297 855 aa4.85□□□□□ -1.63
RPT6YGL048C GRE3P38715 327 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
RPT6YGL048C MSS4P38994 779 aa4.85□□□□□ -1.63
RPT6YGL048C DPB11P47027 764 aaPredicted RBP4.85□□□□□ -1.63
RPT6YGL048C PKP2P53170 491 aa4.85□□□□□ -1.63
RPT6YGL048C GET1P53192 235 aa4.85□□□□□ -1.63
RPT6YGL048C YGR079WP53249 370 aa4.85□□□□□ -1.63
RPT6YGL048C APM1Q00776 475 aaPredicted RBP4.85□□□□□ -1.63
RPT6YGL048C ACS1Q01574 713 aa4.85□□□□□ -1.63
RPT6YGL048C NCE101Q02820 53 aa4.85□□□□□ -1.63
RPT6YGL048C PFA5Q03289 374 aa4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms