RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TMEM134Q9H6X4 195 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 BLOC1S4Q9NUP1 217 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 NPHP3-ACAD11A0A0J9YXS1 232 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 SLC16A4O15374 487 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 LINC01565O15544 149 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 ALDH2P05091 517 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 PLS3P13797 630 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 SCNN1GP51170 649 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 SMTNP53814 917 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 BMS1Q14692 1282 aaKnown RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 PUS10Q3MIT2 529 aaKnown RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 DCAF4L1Q3SXM0 396 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 ATF7IP2Q5U623 682 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 EEF1DP3Q658K8 133 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 USP49Q70CQ1 688 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 APBB1IPQ7Z5R6 666 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 DDX53Q86TM3 631 aaKnown RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 GPBP1Q86WP2 473 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 COLGALT2Q8IYK4 626 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 LRRC15Q8TF66 581 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 CLIC6Q96NY7 704 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 CDCA3Q99618 268 aaPredicted RBP16.54■□□□□ 0.24
PHGDH-231ENST00000641939 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 FAN1Q9Y2M0 1017 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 C5orf42Q9H799 3197 aa16.54■□□□□ 0.24
PHGDH-231ENST00000641939 HIDE1A8MVS5 230 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 NRP1O14786 923 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 PER2O15055 1255 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 TBX10O75333 385 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 TXLNAP40222 546 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 NASPP49321 788 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 NDUFV1P49821 464 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 DSC1Q08554 894 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 MCM6Q14566 821 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 SMC1AQ14683 1233 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 DUSP6Q16828 381 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 TAS1R3Q7RTX0 852 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 VPS52Q8N1B4 723 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 GSTCDQ8NEC7 633 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 BCL7CQ8WUZ0 217 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 LARP4BQ92615 738 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 RPS6KC1Q96S38 1066 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 MRPL4Q9BYD3 311 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 ZBP1Q9H171 429 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 SNTG2Q9NY99 539 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 KLK14Q9P0G3 267 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
PHGDH-231ENST00000641939 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 CCDC39Q9UFE4 941 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 TNFSF13BQ9Y275 285 aa16.53■□□□□ 0.24
PHGDH-231ENST00000641939 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 RECQL4O94761 1208 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-231ENST00000641939 DDIT3P35638 169 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 OR1G1P47890 313 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 GRIK3Q13003 919 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 STK38Q15208 465 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-231ENST00000641939 MRPL43Q8N983 215 aaKnown RBP16.52■□□□□ 0.24
PHGDH-231ENST00000641939 SPRYD3Q8NCJ5 442 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 TMEM161BQ8NDZ6 487 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-231ENST00000641939 NECAB3Q96P71 396 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-231ENST00000641939 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
PHGDH-231ENST00000641939 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 NR1I2O75469 434 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 CXCL14O95715 111 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 GLP2RO95838 553 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 KRT18P05783 430 aaKnown RBP16.51■□□□□ 0.23
PHGDH-231ENST00000641939 MAPTP10636 758 aaKnown RBP16.51■□□□□ 0.23
PHGDH-231ENST00000641939 CA8P35219 290 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 STRN3Q13033 797 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 CLUL1Q15846 466 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 LINC00301Q8NCQ3 95 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 TARS2Q9BW92 718 aaKnown RBP16.51■□□□□ 0.23
PHGDH-231ENST00000641939 VN1R3Q9BXE9 311 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 CLEC1BQ9P126 229 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 TFIP11Q9UBB9 837 aaKnown RBP16.51■□□□□ 0.23
PHGDH-231ENST00000641939 STK17AQ9UEE5 414 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 FAM50BQ9Y247 325 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
PHGDH-231ENST00000641939 PRG3Q9Y2Y8 225 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-231ENST00000641939 H0YCG3 227 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 TNFRSF10AO00220 468 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 SPTLC2O15270 562 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 FAM13AO94988 1023 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 F13A1P00488 732 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 CTSAP10619 480 aa16.5■□□□□ 0.23
PHGDH-231ENST00000641939 IL9P15248 144 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms