RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 CLEC1BQ9P126 229 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 NR2E1Q9Y466 385 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 MYH11P35749 1972 aa10.35□□□□□ -0.75
PHGDH-228ENST00000641847 NRCAMQ92823 1304 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 NCOR2Q9Y618 2525 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 IGKV6-21A0A0C4DH24 114 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 MAGEB2O15479 319 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 GAS2O43903 313 aaKnown RBP10.34□□□□□ -0.75
PHGDH-228ENST00000641847 RHOBTB3O94955 611 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 HOXC8P31273 242 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 ZNF131P52739 623 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 NLRP12P59046 1061 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 ZNF445P59923 1031 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 EHHADHQ08426 723 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 MORC3Q14149 939 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 HIC1Q14526 733 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 FAM26FQ5R3K3 315 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 MARCH8Q5T0T0 291 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 MTHFD1LQ6UB35 978 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 RBM23Q86U06 439 aaKnown RBP10.34□□□□□ -0.75
PHGDH-228ENST00000641847 EXOC8Q8IYI6 725 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 LRRC71Q8N4P6 559 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 METTL13Q8N6R0 699 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 TCP11Q8WWU5 503 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 TMEM143Q96AN5 459 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 FUCA2Q9BTY2 467 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 SEL1LQ9UBV2 794 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 BARX2Q9UMQ3 279 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-228ENST00000641847 GDAQ9Y2T3 454 aa10.34□□□□□ -0.75
PHGDH-228ENST00000641847 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 KAT6AQ92794 2004 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 CFAP47Q6ZTR5 3102 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 MBLAC1A4D2B0 266 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 SFI1A8K8P3 1242 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 PLS3P13797 630 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 BMP6P22004 513 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 KLRC1P26715 233 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ARL2P36404 184 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 CLCN3P51790 818 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 PEX3P56589 373 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 DMP1Q13316 513 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 DRP2Q13474 957 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 DPCR1Q3MIW9 517 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ODR4Q5SWX8 454 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF658Q5TYW1 1059 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ASTLQ6HA08 431 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 EFCAB12Q6NXP0 572 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 LRSAM1Q6UWE0 723 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 SMYD4Q8IYR2 804 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 KIAA0895Q8NCT3 520 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 KREMEN2Q8NCW0 462 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 PSPC1Q8WXF1 523 aaKnown RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 BSNDQ8WZ55 320 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 CDCA3Q99618 268 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ANO10Q9NW15 660 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 LARSQ9P2J5 1176 aaKnown RBP10.33□□□□□ -0.76
PHGDH-228ENST00000641847 ZFHX4Q86UP3 3567 aa10.33□□□□□ -0.76
PHGDH-228ENST00000641847 K7ENM7 598 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 TREHO43280 583 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 PDGFBP01127 241 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-228ENST00000641847 MYBP10242 640 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 GLRA2P23416 452 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 TMOD1P28289 359 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 NPTX2P47972 431 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 DNM2P50570 870 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 CLCN5P51795 746 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 STK4Q13043 487 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 PSMD2Q13200 908 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.76
PHGDH-228ENST00000641847 IER5Q5VY09 327 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 RUFY4Q6ZNE9 571 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 ADGRD2Q7Z7M1 963 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 RSPH3Q86UC2 560 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 POF1BQ8WVV4 589 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 FGFBP2Q9BYJ0 223 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 GTPBP4Q9BZE4 634 aaKnown RBP10.32□□□□□ -0.76
PHGDH-228ENST00000641847 FAM49AQ9H0Q0 323 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-228ENST00000641847 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 TSPY26PQ9H489 355 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 C17orf75Q9HAS0 396 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 SLC39A2Q9NP94 309 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 KMT5AQ9NQR1 393 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 AAASQ9NRG9 546 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 OLFML3Q9NRN5 406 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms