RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 KLHL10Q6JEL2 608 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 SPATA21Q7Z572 469 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 ZNF513Q8N8E2 541 aaPredicted RBP6.4□□□□□ -1.38
CASC19-260ENST00000641828 ZBTB38Q8NAP3 1195 aaPredicted RBP6.4□□□□□ -1.38
CASC19-260ENST00000641828 CCDC197Q8NCU1 140 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 IL17REQ8NFR9 667 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 FAM81AQ8TBF8 368 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 NOC3LQ8WTT2 800 aaKnown RBP6.4□□□□□ -1.38
CASC19-260ENST00000641828 CENPTQ96BT3 561 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 DTNBP1Q96EV8 351 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 PLCB1Q9NQ66 1216 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 ZNHIT6Q9NWK9 470 aaKnown RBP6.4□□□□□ -1.38
CASC19-260ENST00000641828 SLC12A4Q9UP95 1085 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 L3MBTL1Q9Y468 752 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 HYOU1Q9Y4L1 999 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 ECM29Q5VYK3 1845 aa6.4□□□□□ -1.38
CASC19-260ENST00000641828 PALLDQ8WX93 1383 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 TTC26A0AVF1 554 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 LRRD1A4D1F6 860 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 IQCA1LA6NCM1 817 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 GRM8O00222 908 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 ORC4O43929 436 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 S100BP04271 92 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 GNAT1P11488 350 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 HMGB2P26583 209 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 HPDP32754 393 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 HSPA9P38646 679 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 AFF1P51825 1210 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 SOX10P56693 466 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 STX17P56962 302 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 PPP2R2AP63151 447 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 CDK17Q00537 523 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 UBXN1Q04323 297 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 IFI16Q16666 785 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 RILPL1Q5EBL4 403 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 TCP11X2Q5H9J9 407 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 ZMYM1Q5SVZ6 1142 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 AGBL2Q5U5Z8 902 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 WDR59Q6PJI9 974 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 KSR2Q6VAB6 950 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 SMIM5Q71RC9 77 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 ARHGAP22Q7Z5H3 698 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 PNMA8AQ86V59 439 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 RBM12BQ8IXT5 1001 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 STK11IPQ8N1F8 1099 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 B4GALNT2Q8NHY0 566 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 AGAP11Q8TF27 550 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 RAPGEF5Q92565 580 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 BICD1Q96G01 975 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 KLHDC7BQ96G42 594 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 VPS16Q9H269 839 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 SUDS3Q9H7L9 328 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 CNOT10Q9H9A5 744 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 KCNMB3Q9NPA1 279 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 CWC25Q9NXE8 425 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.4□□□□□ -1.39
CASC19-260ENST00000641828 CHPF2Q9P2E5 772 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 RWDD2AQ9UIY3 292 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 FBXO2Q9UK22 296 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 ZNF214Q9UL59 606 aaPredicted RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 NFU1Q9UMS0 254 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 SRPRBQ9Y5M8 271 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 CSADQ9Y600 493 aa6.4□□□□□ -1.39
CASC19-260ENST00000641828 BRCA1P38398 1863 aaKnown RBP6.4□□□□□ -1.39
CASC19-260ENST00000641828 GLTPD2A6NH11 291 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 CHURC1-FNTBB4DL54 471 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 PDLIM1O00151 329 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ASAP2O43150 1006 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 PRC1O43663 620 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ATP2C2O75185 946 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 RNF8O76064 485 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 NPTXRO95502 500 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ALBP02768 609 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 VIMP08670 466 aaKnown RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 PDGFRBP09619 1106 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 IL2RBP14784 551 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 RAG1P15918 1043 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 DPEP1P16444 411 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 CDC25AP30304 524 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 MATR3P43243 847 aaKnown RBP eCLIP6.39□□□□□ -1.396e-7■■■□□ 16
CASC19-260ENST00000641828 CARSP49589 748 aaKnown RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 MRPS35P82673 323 aaKnown RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 GNPTABQ3T906 1256 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 CFAP221Q4G0U5 840 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 LRRC23Q53EV4 343 aaPredicted RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 ODF2Q5BJF6 829 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ZC3H12BQ5HYM0 836 aaKnown RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 NFXL1Q6ZNB6 911 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ANKRD23Q86SG2 305 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 NIM1KQ8IY84 436 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 LINS1Q8NG48 757 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 SMCR8Q8TEV9 937 aaPredicted RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 NINJ1Q92982 152 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 ACSF2Q96CM8 615 aaPredicted RBP6.39□□□□□ -1.39
CASC19-260ENST00000641828 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 GORASP1Q9BQQ3 440 aa6.39□□□□□ -1.39
CASC19-260ENST00000641828 EPB41L5Q9HCM4 733 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms