RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MGEA5O60502 916 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 ZNF623O75123 536 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 NR3C1P04150 777 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 MCF2P10911 925 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CD52P31358 61 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 RGS19P49795 217 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 TCTN1Q2MV58 587 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CDKAL1Q5VV42 579 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 NOTUMQ6P988 496 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 MPZL3Q6UWV2 235 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CRELD2Q6UXH1 353 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-225ENST00000640900 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CATSPER4Q7RTX7 472 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 MRPL10Q7Z7H8 261 aaKnown RBP9.97□□□□□ -0.81
SCARB2-225ENST00000640900 ZSWIM2Q8NEG5 633 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 RNF25Q96BH1 459 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CEP63Q96MT8 703 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 MKNK1Q9BUB5 465 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CDT1Q9H211 546 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 CTNND2Q9UQB3 1225 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 GINS2Q9Y248 185 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 TNRC18O15417 2968 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-225ENST00000640900 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
SCARB2-225ENST00000640900 A0A0U1RQF3 1178 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 C9IYK1 514 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 RBAK-RBAKDNI3L0D1 243 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 OGTO15294 1046 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 INPPL1O15357 1258 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 CLDN3O15551 220 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 CALUO43852 315 aaPredicted RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 EXTL3O43909 919 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 RPL13P26373 211 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 LIG4P49917 911 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 MYL5Q02045 173 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 PAK2Q13177 524 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 NOLC1Q14978 699 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 DCAF4L1Q3SXM0 396 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 XKR4Q5GH76 650 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 SLC27A1Q6PCB7 646 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 ALKAL1Q6UXT8 129 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 APTXQ7Z2E3 356 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 ZNF598Q86UK7 904 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 APBB2Q92870 758 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 CPB2Q96IY4 423 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 MFSD14AQ96MC6 490 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 SCLT1Q96NL6 688 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 FTHL17Q9BXU8 183 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 IFIH1Q9BYX4 1025 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 PPP1R12CQ9BZL4 782 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 THAP9Q9H5L6 903 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 KIAA1586Q9HCI6 787 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 RGS18Q9NS28 235 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 HSPBP1Q9NZL4 362 aa9.96□□□□□ -0.82
SCARB2-225ENST00000640900 CPSF3Q9UKF6 684 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.82
SCARB2-225ENST00000640900 TTC3P53804 2025 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 CLIC2O15247 247 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 SLC16A3O15427 465 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 AKAP3O75969 853 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 ERLIN2O94905 339 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 PFKMP08237 780 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 ATF7P17544 494 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 NR2F2P24468 414 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 GRM5P41594 1212 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 CASP4P49662 377 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 CCL23P55773 120 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 STX17P56962 302 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 CLDN10P78369 228 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 NCBP1Q09161 790 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 ADAM9Q13443 819 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 KYAT1Q16773 422 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 CSGALNACT2Q8N6G5 542 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 XXYLT1Q8NBI6 393 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 SEPT8Q92599 483 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 SCLYQ96I15 445 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 TSG101Q99816 390 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 EIF2AQ9BY44 585 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 RBSNQ9H1K0 784 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 SAMSN1Q9NSI8 373 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 AGO2Q9UKV8 859 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 PIN4Q9Y237 131 aaKnown RBP9.95□□□□□ -0.82
SCARB2-225ENST00000640900 NFE2L3Q9Y4A8 694 aa9.95□□□□□ -0.82
SCARB2-225ENST00000640900 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.94□□□□□ -0.82
SCARB2-225ENST00000640900 TTC26A0AVF1 554 aa9.94□□□□□ -0.82
SCARB2-225ENST00000640900 SMTNL1A8MU46 457 aa9.94□□□□□ -0.82
SCARB2-225ENST00000640900 ENPP3O14638 875 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms