RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 PTGS1P23219 599 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-224ENST00000640880 WASP42768 502 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 POLD3Q15054 466 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-224ENST00000640880 CCDC157Q569K6 752 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 MIGA2Q7L4E1 593 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 MAEAQ7L5Y9 396 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 CALML6Q8TD86 181 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 GAB3Q8WWW8 586 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 RGMAQ96B86 450 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 ARFGAP3Q9NP61 516 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 EVLQ9UI08 416 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-224ENST00000640880 PCDHB6Q9Y5E3 794 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 DIP2AQ14689 1571 aa8.09□□□□□ -1.11
SCARB2-224ENST00000640880 MED14O60244 1454 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
SCARB2-224ENST00000640880 FITM1A5D6W6 292 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 RHPN2P1A8MT19 583 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 PSPNO60542 156 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 OPHN1O60890 802 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 FTLP02792 175 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-224ENST00000640880 DBHP09172 617 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 MCAMP43121 646 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 MAP2K6P52564 334 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 CD276Q5ZPR3 534 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-224ENST00000640880 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 SLC39A2Q9NP94 309 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 CORO2BQ9UQ03 480 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 LZTS1Q9Y250 596 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 LRCH1Q9Y2L9 728 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 CFAP20Q9Y6A4 193 aaKnown RBP8.08□□□□□ -1.12
SCARB2-224ENST00000640880 NEXMIFQ5QGS0 1516 aa8.08□□□□□ -1.12
SCARB2-224ENST00000640880 RPGRIP1LQ68CZ1 1315 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 KPNA5O15131 536 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 SRGAP3O43295 1099 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 TNFSF4P23510 183 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 THBS2P35442 1172 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 ARL4AP40617 200 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 SNX17Q15036 470 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 TUBB8Q3ZCM7 444 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 LRSAM1Q6UWE0 723 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 GAREM2Q75VX8 874 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 DPP9Q86TI2 863 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 NKAPQ8N5F7 415 aaKnown RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 CDYL2Q8N8U2 506 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 GLB1L3Q8NCI6 653 aaPredicted RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 ATXN2LQ8WWM7 1075 aaKnown RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 CDK5RAP3Q96JB5 506 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 WDR12Q9GZL7 423 aaKnown RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 VPS11Q9H270 941 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 GREM2Q9H772 168 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 INCENPQ9NQS7 918 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 GPRC5BQ9NZH0 403 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 DTLQ9NZJ0 730 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 ANAPC4Q9UJX5 808 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 DBR1Q9UK59 544 aaKnown RBP8.07□□□□□ -1.12
SCARB2-224ENST00000640880 PLEKHG1Q9ULL1 1385 aa8.07□□□□□ -1.12
SCARB2-224ENST00000640880 ZFYVE9O95405 1425 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 F8W031 263 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-224ENST00000640880 CD8BP10966 210 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 SARSP49591 514 aaKnown RBP8.06□□□□□ -1.12
SCARB2-224ENST00000640880 GPR15P49685 360 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 RAB1AP62820 205 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 GPSM2P81274 684 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 DSC2Q02487 901 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 BIRC3Q13489 604 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 NLRX1Q86UT6 975 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 PLBD2Q8NHP8 589 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 NT5C1BQ96P26 610 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 NOL10Q9BSC4 688 aaKnown RBP8.06□□□□□ -1.12
SCARB2-224ENST00000640880 C22orf23Q9BZE7 217 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 PITHD1Q9GZP4 211 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-224ENST00000640880 ARMT1Q9H993 441 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 CERS4Q9HA82 394 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 TNFRSF12AQ9NP84 129 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 DCP1AQ9NPI6 582 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-224ENST00000640880 FTSJ1Q9UET6 329 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 SCOCQ9UIL1 159 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 GPR160Q9UJ42 338 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 SYNPO2Q9UMS6 1093 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 GTF2A1LQ9UNN4 478 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 PCDHA13Q9Y5I0 950 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 LAMC1P11047 1609 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 ANKRD30BQ9BXX2 1392 aa8.06□□□□□ -1.12
SCARB2-224ENST00000640880 CPS1P31327 1500 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 MAFGO15525 162 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 ZBTB7AO95365 584 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 CYBBP04839 570 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 H2AFB1P0C5Y9 115 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 MYF5P13349 255 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 ABCB4P21439 1286 aa8.05□□□□□ -1.12
SCARB2-224ENST00000640880 GALK1P51570 392 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms