RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	SLFN12L	Q6IEE8	588 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	FAM114A1	Q8IWE2	563 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	FAM186B	Q8IYM0	893 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	CEP120	Q8N960	986 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	FAM213A	Q9BRX8	229 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	TCHP	Q9BT92	498 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	MKNK1	Q9BUB5	465 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	INTS13	Q9NVM9	706 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	IFNK	Q9P0W0	207 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	ST3GAL5	Q9UNP4	418 aa		19.37	■□□□□ 0.69
SPIN3-238	ENST00000640421	CD52	P31358	61 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	PSMC2	P35998	433 aa	Known RBP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	TNFSF9	P41273	254 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	PCBP1	Q15365	356 aa	Known RBP eCLIP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	SNRNP35	Q16560	246 aa	Known RBP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	TRIM59	Q8IWR1	403 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	GPD1L	Q8N335	351 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	TUBGCP2	Q9BSJ2	902 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	NOC4L	Q9BVI4	516 aa	Known RBP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	MAGEC2	Q9UBF1	373 aa	Predicted RBP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	PIN4	Q9Y237	131 aa	Known RBP	19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	FRMD4B	Q9Y2L6	1034 aa		19.36	■□□□□ 0.69
SPIN3-238	ENST00000640421	DCDC2C	A8MYV0	355 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	TLR3	O15455	904 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	SERPINC1	P01008	464 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	EPB41	P11171	864 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	COPB1	P53618	953 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	SPAG1	Q07617	926 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	GPNMB	Q14956	572 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	MIIP	Q5JXC2	388 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	COL13A1	Q5TAT6	717 aa	Predicted RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	LRRC8D	Q7L1W4	858 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	FRMD5	Q7Z6J6	570 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	PLEKHO2	Q8TD55	490 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	XPO4	Q9C0E2	1151 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	VPS16	Q9H269	839 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	PADI3	Q9ULW8	664 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	TANC1	Q9C0D5	1861 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	EXTL3	O43909	919 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	GNA14	O95837	355 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	SELP	P16109	830 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	CAPN2	P17655	700 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	MTIF2	P46199	727 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	WNT7B	P56706	349 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	PTPN21	Q16825	1174 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	TMEM192	Q8IY95	271 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	EIF2A	Q9BY44	585 aa	Known RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	ERVK-5	Q9HDB9	667 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	PCDH10	Q9P2E7	1040 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	ARMCX3	Q9UH62	379 aa	Predicted RBP	19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	TBX21	Q9UL17	535 aa		19.35	■□□□□ 0.69
SPIN3-238	ENST00000640421	SCN5A	Q14524	2016 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	PITPNM1	O00562	1244 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	NFX1	Q12986	1120 aa	Known RBP	19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	BFSP2	Q13515	415 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	NOTUM	Q6P988	496 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	THNSL1	Q8IYQ7	743 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	TRIM5	Q9C035	493 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	TMX1	Q9H3N1	280 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	HIPK3	Q9H422	1215 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	ALPK3	Q96L96	1907 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421	TET1	Q8NFU7	2136 aa		19.34	■□□□□ 0.69
SPIN3-238	ENST00000640421		A0A1B0GTH6	734 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	N4BP3	O15049	544 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	OGT	O15294	1046 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	MEFV	O15553	781 aa	Predicted RBP	19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	TEX33	O43247	280 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	PRKCSH	P14314	528 aa	Predicted RBP	19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	ZNF75D	P51815	510 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	UBASH3A	P57075	661 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	DLG4	P78352	724 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	UBXN11	Q5T124	520 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	SLC27A1	Q6PCB7	646 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	CCDC155	Q8N6L0	562 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	WNT8A	Q9H1J5	351 aa		19.33	■□□□□ 0.69
SPIN3-238	ENST00000640421	KIAA0391	O15091	583 aa	Known RBP	19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	MAPK13	O15264	365 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	MGEA5	O60502	916 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	NBN	O60934	754 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	NPTXR	O95502	500 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	ADCY5	O95622	1261 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	MCF2	P10911	925 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	AXL	P30530	894 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	OSTN	P61366	133 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	CYP24A1	Q07973	514 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	PAK2	Q13177	524 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	C1orf220	Q5T0J3	134 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	SLC35C1	Q96A29	364 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	MFSD14A	Q96MC6	490 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	PPP1R12C	Q9BZL4	782 aa		19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	CPSF3	Q9UKF6	684 aa	Known RBP	19.33	■□□□□ 0.68
SPIN3-238	ENST00000640421	LAMA2	P24043	3122 aa	Known RBP	19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	GPR182	O15218	404 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	CLTB	P09497	229 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	TRIM49	P0CI25	452 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	TRIM49C	P0CI26	452 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	CYP2C18	P33260	490 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	NCBP1	Q09161	790 aa	Known RBP	19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	BFSP1	Q12934	665 aa		19.32	■□□□□ 0.68
SPIN3-238	ENST00000640421	MAN2A1	Q16706	1144 aa		19.32	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms