RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 AOC3Q16853 763 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 C1orf220Q5T0J3 134 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ZNF564Q8TBZ8 553 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 EPS8L1Q8TE68 723 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 PWWP2AQ96N64 755 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 NCAPGQ9BPX3 1015 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 TOPORSQ9NS56 1045 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 HSPBP1Q9NZL4 362 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 MXI1P50539 228 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 PEX5P50542 639 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 MIGA2Q7L4E1 593 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 IL31RAQ8NI17 732 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 KREMEN1Q96MU8 473 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 GLIS2Q9BZE0 524 aaPredicted RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 TRIM7Q9C029 511 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 CTNNAL1Q9UBT7 734 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ODF2LQ9ULJ1 636 aa17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 TPX2Q9ULW0 747 aaKnown RBP17.78■□□□□ 0.44
HNRNPU-228ENST00000640306 ATP8B3O60423 1300 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 RASGRF2O14827 1237 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 RIPK2O43353 540 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 ITGB5P18084 799 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 MMP13P45452 471 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 HIBCHQ6NVY1 386 aaPredicted RBP17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 LLGL2Q6P1M3 1020 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 FAM228AQ86W67 206 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 CBWD2Q8IUF1 395 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 SEMA4DQ92854 862 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 TMEM117Q9H0C3 514 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 HOMER2Q9NSB8 354 aa17.77■□□□□ 0.44
HNRNPU-228ENST00000640306 CHUKO15111 745 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 ADRB2P07550 413 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 COILP38432 576 aaPredicted RBP17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 PEX3P56589 373 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 NFIL3Q16649 462 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 INTS8Q75QN2 995 aaKnown RBP17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 ANKRD42Q8N9B4 389 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 MASTLQ96GX5 879 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.43
HNRNPU-228ENST00000640306 MIF4GDA9UHW6 222 aaKnown RBP17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 RTN2O75298 545 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 DRP2Q13474 957 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 SNCBQ16143 134 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 PPP2R5EQ16537 467 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 SLC13A5Q86YT5 568 aaPredicted RBP17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 TBC1D31Q96DN5 1066 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 PGM2Q96G03 612 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 LARSQ9P2J5 1176 aaKnown RBP17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 LTBP1Q14766 1721 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 CTNNA2P26232 953 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 PLCB4Q15147 1175 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 STRIP1Q5VSL9 837 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 C11orf63Q6NUN7 778 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 TCP11Q8WWU5 503 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 ASIC3Q9UHC3 531 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
HNRNPU-228ENST00000640306 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 AUHQ13825 339 aaKnown RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 SGSM3Q96HU1 749 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 ABCF3Q9NUQ8 709 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 BAIAP2L1Q9UHR4 511 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PCDHA3Q9Y5H8 950 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 VIL1P09327 827 aaKnown RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 CHKAP35790 457 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 SOX10P56693 466 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 RASA3Q14644 834 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 SEPT14Q6ZU15 432 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 HAUS6Q7Z4H7 955 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 TBC1D1Q86TI0 1168 aaPredicted RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PNMA8AQ86V59 439 aaPredicted RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 LDHDQ86WU2 507 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PI4K2AQ9BTU6 479 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 ARHGEF10LQ9HCE6 1279 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 KCNH7Q9NS40 1196 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 SAMD15Q9P1V8 674 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 TBK1Q9UHD2 729 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PCYOX1Q9UHG3 505 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 NOCTQ9UK39 431 aaKnown RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PODXLO00592 558 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 FMO1Q01740 532 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 TNIP1Q15025 636 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 ZKSCAN8Q15776 578 aaPredicted RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 C6orf118Q5T5N4 469 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 PLA2G4FQ68DD2 849 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 ANKS4BQ8N8V4 417 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 GDAP1Q8TB36 358 aa17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 MYCBPQ99417 103 aaPredicted RBP17.75■□□□□ 0.43
HNRNPU-228ENST00000640306 KCNK9Q9NPC2 374 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms