RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 MAPK13O15264 365 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 ZEB2O60315 1214 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 RTN2O75298 545 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CTNNA1P35221 906 aaKnown RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PEX5P50542 639 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 HADHBP55084 474 aaKnown RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 MCCD1P59942 119 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CETN1Q12798 172 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 LLGL1Q15334 1064 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 DUPD1Q68J44 220 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 TTC27Q6P3X3 843 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PRELID2Q8N945 189 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CEP170P1Q96L14 293 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 ZSWIM1Q9BR11 485 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 RLFQ13129 1914 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 COL11A1P12107 1806 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PARP14Q460N5 1801 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PEX10O60683 326 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PYGMP11217 842 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 KCNA2P16389 499 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 HPDP32754 393 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PTGIRP43119 386 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 KRT76Q01546 638 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 DR1Q01658 176 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 DHX9Q08211 1270 aaKnown RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 LMBRD2Q68DH5 695 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 C11orf63Q6NUN7 778 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 SWSAP1Q6NVH7 229 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 LRIG3Q6UXM1 1119 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 RHOT2Q8IXI1 618 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 DDX1Q92499 740 aaKnown RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CD101Q93033 1021 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 TXLNGYQ9BZA5 131 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 VPS33BQ9H267 617 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 EPB41L4BQ9H329 900 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 KMT5AQ9NQR1 393 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 ZDHHC18Q9NUE0 388 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 SNX24Q9Y343 169 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 DAAM1Q9Y4D1 1078 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-225ENST00000640209 PCDHA10Q9Y5I2 948 aa10.08□□□□□ -0.8
NECAP1-225ENST00000640209 KIAA1217Q5T5P2 1943 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 PMM2O15305 246 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 DLATP10515 647 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 CYP11B1P15538 503 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 SFNP31947 248 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 GMPSP49915 693 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 SEC24CP53992 1094 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 HMGCS2P54868 508 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 BACE1P56817 501 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 DMP1Q13316 513 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 MKRN4PQ13434 485 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 EMC10Q5UCC4 262 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 KRT39Q6A163 491 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 SNRNP48Q6IEG0 339 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 ZDHHC24Q6UX98 284 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 PHLDB2Q86SQ0 1253 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 CCDC60Q8IWA6 550 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■■■ 29
NECAP1-225ENST00000640209 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 FBXL18Q96ME1 805 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 NUP85Q9BW27 656 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TAOK3Q9H2K8 898 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 PDLIM7Q9NR12 457 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 MAP3K20Q9NYL2 800 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TCEAL9Q9UHQ7 104 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 COQ4Q9Y3A0 265 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 UTP11Q9Y3A2 253 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 LSP1P33241 339 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 GPC3P51654 580 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 CORO7P57737 925 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 CYP24A1Q07973 514 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 FSTL1Q12841 308 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 SCARA3Q6AZY7 606 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 LLGL2Q6P1M3 1020 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 NLRX1Q86UT6 975 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 JAMLQ86YT9 394 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 FMNL3Q8IVF7 1028 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 LRRC45Q96CN5 670 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 ERP44Q9BS26 406 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TRIM7Q9C029 511 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 TMEM8AQ9HCN3 771 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
NECAP1-225ENST00000640209 CNOT8Q9UFF9 292 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 ZNF214Q9UL59 606 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 DIS3Q9Y2L1 958 aaKnown RBP10.07□□□□□ -0.8
NECAP1-225ENST00000640209 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-225ENST00000640209 KIAA0391O15091 583 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms