RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 XPO6Q96QU8 1125 aaKnown RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 PABPC3Q9H361 631 aaKnown RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 SLC40A1Q9NP59 571 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 A6NNZ2 444 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 PHF2O75151 1096 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 PPFIA2O75334 1257 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 MTM1Q13496 603 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 MTMR1Q13613 665 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 RASA3Q14644 834 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 KIF22Q14807 665 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 TUBB8Q3ZCM7 444 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 ACCSQ96QU6 501 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 INTS9Q9NV88 658 aaKnown RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-232ENST00000639956 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
SPIN3-232ENST00000639956 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
SPIN3-232ENST00000639956 PTGIRP43119 386 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 SNRNP35Q16560 246 aaKnown RBP13.39□□□□□ -0.27
SPIN3-232ENST00000639956 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 RHOT2Q8IXI1 618 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 VCPKMTQ9H867 229 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 ADSSP30520 456 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 CHKAP35790 457 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 MRPS9P82933 396 aaKnown RBP13.39□□□□□ -0.27
SPIN3-232ENST00000639956 FMO1Q01740 532 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 CYFIP1Q7L576 1253 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
SPIN3-232ENST00000639956 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 CHMP6Q96FZ7 201 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 BICD1Q96G01 975 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-232ENST00000639956 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 SEL1LQ9UBV2 794 aa13.39□□□□□ -0.27
SPIN3-232ENST00000639956 DENND3A2RUS2 1198 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 HSPA1LP34931 641 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CDR1P51861 262 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 AGBL2Q5U5Z8 902 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CNPY4Q8N129 248 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 OGFOD1Q8N543 542 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 RASGRF2O14827 1237 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CFHP08603 1231 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CYP11B1P15538 503 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 DRD4P21917 467 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 COILP38432 576 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 KYNUQ16719 465 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SGO2Q562F6 1265 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 HOOK3Q86VS8 718 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 HVCN1Q96D96 273 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 FAM213AQ9BRX8 229 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 RANBP17Q9H2T7 1088 aaKnown RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 RTN2O75298 545 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 ENTPD3O75355 529 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 PLS3P13797 630 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CNGA1P29973 690 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 PEX5P50542 639 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 C6orf89Q6UWU4 347 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 CEP89Q96ST8 783 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 PAIP2Q9BPZ3 127 aaKnown RBP13.38□□□□□ -0.27
SPIN3-232ENST00000639956 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
SPIN3-232ENST00000639956 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 DHX15O43143 795 aaKnown RBP13.37□□□□□ -0.27
SPIN3-232ENST00000639956 PIAS1O75925 651 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 FSBPO95073 299 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 RPS6P62753 249 aaKnown RBP13.37□□□□□ -0.27
SPIN3-232ENST00000639956 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-232ENST00000639956 KRT17Q04695 432 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 ANKRD20A8PQ5CZ79 823 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 KAZNQ674X7 775 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 SCARA3Q6AZY7 606 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-232ENST00000639956 TCP11Q8WWU5 503 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
SPIN3-232ENST00000639956 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
SPIN3-232ENST00000639956 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms