RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 HACE1Q8IYU2 909 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 RNF168Q8IYW5 571 aaPredicted RBP18.7■□□□□ 0.58
SMN2-216ENST00000638794 GSTCDQ8NEC7 633 aa18.7■□□□□ 0.58
SMN2-216ENST00000638794 A0A1B0GUA9 196 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 LRRIQ4A6NIV6 560 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 NPTXRO95502 500 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 GLUD2P49448 558 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 SAFBQ15424 915 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMN2-216ENST00000638794 KIAA0319Q5VV43 1072 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 CCDC149Q6ZUS6 474 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 PLCD3Q8N3E9 789 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 MAN1C1Q9NR34 630 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 SSX2IPQ9Y2D8 614 aa18.69■□□□□ 0.58
SMN2-216ENST00000638794 TEX28O15482 410 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
SMN2-216ENST00000638794 NR1I2O75469 434 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 ADH1AP07327 375 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 CDCA2Q69YH5 1023 aaPredicted RBP18.68■□□□□ 0.58
SMN2-216ENST00000638794 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 CCDC83Q8IWF9 413 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 MCPH1Q8NEM0 835 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 C8orf76Q96K31 380 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
SMN2-216ENST00000638794 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 MTCL1Q9Y4B5 1905 aaKnown RBP18.68■□□□□ 0.58
SMN2-216ENST00000638794 DMDP11532 3685 aa18.68■□□□□ 0.58
SMN2-216ENST00000638794 DSG1Q02413 1049 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 GRIK3Q13003 919 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 ZNF174Q15697 407 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 C15orf39Q6ZRI6 1047 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 OTOP3Q7RTS5 596 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 ACSF2Q96CM8 615 aaPredicted RBP18.67■□□□□ 0.58
SMN2-216ENST00000638794 PRIMPOLQ96LW4 560 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 NACC1Q96RE7 527 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 COLEC11Q9BWP8 271 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 RXFP1Q9HBX9 757 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 CHST7Q9NS84 486 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 PRMT7Q9NVM4 692 aaPredicted RBP18.67■□□□□ 0.58
SMN2-216ENST00000638794 PARP2Q9UGN5 583 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 ZMYM2Q9UBW7 1377 aa18.67■□□□□ 0.58
SMN2-216ENST00000638794 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 GLUD1P00367 558 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 MYBP10242 640 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 RPA1P27694 616 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 FUT10Q6P4F1 479 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 ZBTB8OSQ8IWT0 167 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 CMASQ8NFW8 434 aaPredicted RBP18.66■□□□□ 0.58
SMN2-216ENST00000638794 BSNDQ8WZ55 320 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 GPR62Q9BZJ7 368 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
SMN2-216ENST00000638794 FZD8Q9H461 694 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
SMN2-216ENST00000638794 RFPL2O75678 378 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 ORC2Q13416 577 aaPredicted RBP18.65■□□□□ 0.58
SMN2-216ENST00000638794 FAM187BQ17R55 369 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 PADI6Q6TGC4 694 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 ERMNQ8TAM6 284 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 LLPHQ9BRT6 129 aaKnown RBP18.65■□□□□ 0.58
SMN2-216ENST00000638794 PDZD7Q9H5P4 517 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 ADAM28Q9UKQ2 775 aa18.65■□□□□ 0.58
SMN2-216ENST00000638794 DOCK8Q8NF50 2099 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 CCDC195A0A1B0GUA6 201 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 USP41Q3LFD5 358 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 ELMSAN1Q6PJG2 1045 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 FBXO18Q8NFZ0 1043 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 PAAF1Q9BRP4 392 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 FAM86C1Q9NVL1 165 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 DPP7Q9UHL4 492 aa18.64■□□□□ 0.57
SMN2-216ENST00000638794 VPS13AQ96RL7 3174 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 N4BP3O15049 544 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
SMN2-216ENST00000638794 EDN1P05305 212 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 CYP11B2P19099 503 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 PRPF4BQ13523 1007 aaKnown RBP18.63■□□□□ 0.57
SMN2-216ENST00000638794 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
SMN2-216ENST00000638794 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 GLYCTKQ8IVS8 523 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 TMEM105Q8N8V8 129 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 RIN2Q8WYP3 895 aaPredicted RBP18.63■□□□□ 0.57
SMN2-216ENST00000638794 RHOBTB2Q9BYZ6 727 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 KCNK12Q9HB15 430 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 WDR6Q9NNW5 1121 aaKnown RBP18.63■□□□□ 0.57
SMN2-216ENST00000638794 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMN2-216ENST00000638794 SNTG2Q9NY99 539 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 USP20Q9Y2K6 914 aa18.63■□□□□ 0.57
SMN2-216ENST00000638794 CASTOR2A6NHX0 329 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms