RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CRKP46108 304 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 PRELPP51888 382 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 AGAP11Q8TF27 550 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 C1orf54Q8WWF1 131 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 RUNDC3BQ96NL0 473 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
SNIP1-204ENST00000638725 ECT2Q9H8V3 914 aa11.72□□□□□ -0.53
SNIP1-204ENST00000638725 LTBP1Q14766 1721 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 K7ENM7 598 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 TP73O15350 636 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 CLDN3O15551 220 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 GAS7O60861 476 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 VAMP7P51809 220 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 RIPK1Q13546 671 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 SNX1Q13596 522 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 ZNF568Q3ZCX4 644 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 EPC2Q52LR7 807 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 SLC9A9Q8IVB4 645 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 SPICE1Q8N0Z3 855 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 DAW1Q8N136 415 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 KCTD17Q8N5Z5 321 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 GDAP1Q8TB36 358 aa11.71□□□□□ -0.53
SNIP1-204ENST00000638725 ROPN1BQ9BZX4 212 aaPredicted RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 ROPN1Q9HAT0 212 aaPredicted RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 NOCTQ9UK39 431 aaKnown RBP11.71□□□□□ -0.53
SNIP1-204ENST00000638725 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 KIF1CO43896 1103 aaKnown RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 BMP3P12645 472 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 JAG1P78504 1218 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 KRT17Q04695 432 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 ZKSCAN8Q15776 578 aaPredicted RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 TRMT10CQ7L0Y3 403 aaKnown RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 KIF2BQ8N4N8 673 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 PLEKHO2Q8TD55 490 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 PRCCQ92733 491 aaPredicted RBP11.71□□□□□ -0.54
SNIP1-204ENST00000638725 SLC5A5Q92911 643 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 ZNF653Q96CK0 615 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 NACC1Q96RE7 527 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 CBWD1Q9BRT8 395 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 STRA6Q9BX79 667 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 EBF2Q9HAK2 575 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.54
SNIP1-204ENST00000638725 A8MUI8 341 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 HGSO14964 777 aaPredicted RBP11.7□□□□□ -0.54
SNIP1-204ENST00000638725 CYP26A1O43174 497 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 GH1P01241 217 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 THOC1Q96FV9 657 aaKnown RBP11.7□□□□□ -0.54
SNIP1-204ENST00000638725 GMCL1Q96IK5 515 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 PRR12Q9ULL5 1215 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 MYH11P35749 1972 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 MTA2O94776 668 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 SUN1O94901 812 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 RWDD2BP57060 319 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 FMO1Q01740 532 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 CETN1Q12798 172 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 MPP2Q14168 576 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 NAA25Q14CX7 972 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
SNIP1-204ENST00000638725 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 C12orf50Q8NA57 414 aaPredicted RBP11.7□□□□□ -0.54
SNIP1-204ENST00000638725 GMCL1P1Q8NEA9 526 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 LXNQ9BS40 222 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 KCNQ5Q9NR82 932 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 PI4KBQ9UBF8 816 aa11.7□□□□□ -0.54
SNIP1-204ENST00000638725 RBBP6Q7Z6E9 1792 aaKnown RBP11.7□□□□□ -0.54
SNIP1-204ENST00000638725 DDX39AO00148 427 aaKnown RBP11.69□□□□□ -0.54
SNIP1-204ENST00000638725 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
SNIP1-204ENST00000638725 ANP32DO95626 131 aa11.69□□□□□ -0.54
SNIP1-204ENST00000638725 ARP10275 920 aa11.69□□□□□ -0.54
SNIP1-204ENST00000638725 BNIP1Q12981 228 aa11.69□□□□□ -0.54
SNIP1-204ENST00000638725 TRIP13Q15645 432 aaPredicted RBP11.69□□□□□ -0.54
SNIP1-204ENST00000638725 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms