RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SFI1A8K8P3 1242 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 EPCAMP16422 314 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 PEX3P56589 373 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 PTPN14Q15678 1187 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 NT5DC1Q5TFE4 455 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 FAM173BQ6P4H8 233 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 KIFAP3Q92845 792 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 PAAF1Q9BRP4 392 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 UBN1Q9NPG3 1134 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 GIT1Q9Y2X7 761 aa19.56■□□□□ 0.72
PNKP-230ENST00000638016 NPHP3-ACAD11A0A0J9YXS1 232 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 CCDC169A6NNP5 214 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 ACKR2O00590 384 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 ALDH2P05091 517 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 WEE2P0C1S8 567 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 NPTX2P47972 431 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
PNKP-230ENST00000638016 PPP2R5AQ15172 486 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 HYIQ5T013 277 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 TMEM184AQ6ZMB5 413 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 TAS1R3Q7RTX0 852 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 C12orf76Q8N812 135 aaPredicted RBP19.55■□□□□ 0.72
PNKP-230ENST00000638016 B3GALT6Q96L58 329 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 PRKAG3Q9UGI9 489 aa19.55■□□□□ 0.72
PNKP-230ENST00000638016 PI4K2BG5E9Z4 385 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 C2CD2LO14523 706 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 N4BP3O15049 544 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 RECQL4O94761 1208 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 SP100P23497 879 aaPredicted RBP19.54■□□□□ 0.72
PNKP-230ENST00000638016 SF3A1Q15459 793 aaKnown RBP19.54■□□□□ 0.72
PNKP-230ENST00000638016 TMEM119Q4V9L6 283 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 CEP120Q8N960 986 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 SUSD6Q92537 303 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 GDAQ9Y2T3 454 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 STK24Q9Y6E0 443 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 PLXNA3P51805 1871 aa19.54■□□□□ 0.72
PNKP-230ENST00000638016 PTGESO14684 152 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 SLC12A3P55017 1021 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 ARL6IP4Q66PJ3 421 aaKnown RBP19.53■□□□□ 0.72
PNKP-230ENST00000638016 CABP7Q86V35 215 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 HACE1Q8IYU2 909 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 HASPINQ8TF76 798 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 SLC22A17Q8WUG5 538 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 MUTYHQ9UIF7 546 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 IRAK3Q9Y616 596 aa19.53■□□□□ 0.72
PNKP-230ENST00000638016 CASTOR2A6NHX0 329 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 SLC16A4O15374 487 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 LILRB3O75022 631 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 EFEMP2O95967 443 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 CNPP09543 421 aaKnown RBP19.52■□□□□ 0.72
PNKP-230ENST00000638016 MYBP10242 640 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 COL9A1P20849 921 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 IGFBP6P24592 240 aaPredicted RBP19.52■□□□□ 0.72
PNKP-230ENST00000638016 GRIK3Q13003 919 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 RESTQ13127 1097 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 ATF7IP2Q5U623 682 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 BRAPQ7Z569 592 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 RNF135Q8IUD6 432 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.72
PNKP-230ENST00000638016 CASP10Q92851 521 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 RPGRIP1Q96KN7 1286 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 KLHL5Q96PQ7 755 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 RPS6KC1Q96S38 1066 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 LRFN3Q9BTN0 628 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 GPR62Q9BZJ7 368 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 ARHGAP28Q9P2N2 729 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 CLIC4Q9Y696 253 aa19.52■□□□□ 0.72
PNKP-230ENST00000638016 PHLPP2Q6ZVD8 1323 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 SOD2P04179 222 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 PLA2G4BP0C869 781 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 SRGAP2BP0DMP2 458 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 SYT1P21579 422 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 EFNA5P52803 228 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 DMP1Q13316 513 aaPredicted RBP19.51■□□□□ 0.71
PNKP-230ENST00000638016 CBX2Q14781 532 aaPredicted RBP19.51■□□□□ 0.71
PNKP-230ENST00000638016 SPECC1Q5M775 1068 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 RARS2Q5T160 578 aaKnown RBP19.51■□□□□ 0.71
PNKP-230ENST00000638016 SYT2Q8N9I0 419 aaPredicted RBP19.51■□□□□ 0.71
PNKP-230ENST00000638016 CDK5RAP3Q96JB5 506 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 ADPGKQ9BRR6 497 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 TARS2Q9BW92 718 aaKnown RBP19.51■□□□□ 0.71
PNKP-230ENST00000638016 C1QTNF1Q9BXJ1 281 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 KMT5AQ9NQR1 393 aa19.51■□□□□ 0.71
PNKP-230ENST00000638016 FSD2A1L4K1 749 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 LOC730098B7Z3J9 87 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
PNKP-230ENST00000638016 K7ERI5 159 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 GUCY2CP25092 1073 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 OSTNP61366 133 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PNKP-230ENST00000638016 KARSQ15046 597 aaKnown RBP19.5■□□□□ 0.71
PNKP-230ENST00000638016 NAB2Q15742 525 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 ARSHQ5FYA8 562 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 FUT10Q6P4F1 479 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms