RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 VWA8A3KMH1 1905 aa8.69□□□□□ -1.02
PNKP-229ENST00000637897 TDRD15B5MCY1 1934 aaKnown RBP8.69□□□□□ -1.02
PNKP-229ENST00000637897 DOCK8Q8NF50 2099 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 N4BP1O75113 896 aaKnown RBP8.68□□□□□ -1.02
PNKP-229ENST00000637897 NPTXRO95502 500 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 SKIP12755 728 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 ITGA4P13612 1032 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
PNKP-229ENST00000637897 AXLP30530 894 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 TRAPPC10P48553 1259 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 CLCN4P51793 760 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 KRT17Q04695 432 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 ORC2Q13416 577 aaPredicted RBP8.68□□□□□ -1.02
PNKP-229ENST00000637897 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 EXOC8Q8IYI6 725 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 CEP120Q8N960 986 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 PGBD4Q96DM1 585 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 TMEM169Q96HH4 297 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 RPGRIP1Q96KN7 1286 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 NACC1Q96RE7 527 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 TMEM175Q9BSA9 504 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 BHMT2Q9H2M3 363 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 ADAM7Q9H2U9 754 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 PTPRHQ9HD43 1115 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 CHST7Q9NS84 486 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 PUF60Q9UHX1 559 aaKnown RBP8.68□□□□□ -1.02
PNKP-229ENST00000637897 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 SMC3Q9UQE7 1217 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 CACNA1HO95180 2353 aa8.68□□□□□ -1.02
PNKP-229ENST00000637897 DMDP11532 3685 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.67□□□□□ -1.02
PNKP-229ENST00000637897 LRRIQ4A6NIV6 560 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 C2CD4DB7Z1M9 353 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 TRAK2O60296 914 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 PAPLNO95428 1278 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 BRD1O95696 1058 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 SOD2P04179 222 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 SSBP05455 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
PNKP-229ENST00000637897 GJB2P29033 226 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 DEKP35659 375 aaKnown RBP8.67□□□□□ -1.02
PNKP-229ENST00000637897 ZXDAP98168 799 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 PDIA5Q14554 519 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 PCBP1Q15365 356 aaKnown RBP eCLIP8.67□□□□□ -1.02
PNKP-229ENST00000637897 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
PNKP-229ENST00000637897 IER5LQ5T953 404 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 POTEHQ6S545 545 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 C1orf186Q6ZWK4 172 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 EDAQ92838 391 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 PPP2R3CQ969Q6 453 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 CCDC51Q96ER9 411 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 HERC2P3Q9BVR0 1158 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 HAPLN2Q9GZV7 340 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 RXFP1Q9HBX9 757 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 DDX19AQ9NUU7 478 aaKnown RBP8.67□□□□□ -1.02
PNKP-229ENST00000637897 SNTG2Q9NY99 539 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 FAN1Q9Y2M0 1017 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
PNKP-229ENST00000637897 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ACKR2O00590 384 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 TEX28O15482 410 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ADAM12O43184 909 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RECQL4O94761 1208 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ERLIN2O94905 339 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 PDGFBP01127 241 aaPredicted RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 ALDH2P05091 517 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 MYBP10242 640 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ALADP13716 330 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 HOXB8P17481 243 aaPredicted RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 MUTP22033 750 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 CCT6AP40227 531 aaKnown RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 NAMPTP43490 491 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 OR1G1P47890 313 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ATP2C1P98194 919 aaPredicted RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 DSG1Q02413 1049 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 SOX4Q06945 474 aaPredicted RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 TFDP1Q14186 410 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 HYIQ5T013 277 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RARS2Q5T160 578 aaKnown RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 RINT1Q6NUQ1 792 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 LILRA6Q6PI73 481 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RSPO2Q6UXX9 243 aaPredicted RBP8.66□□□□□ -1.02
PNKP-229ENST00000637897 FAM184AQ8NB25 1140 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 C3orf58Q8NDZ4 430 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 CNNM3Q8NE01 707 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 MCPH1Q8NEM0 835 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RSPH1Q8WYR4 309 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 CASP10Q92851 521 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 RPS6KC1Q96S38 1066 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 ARHGAP28Q9P2N2 729 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 LRWD1Q9UFC0 647 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 FAM50BQ9Y247 325 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms