RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ATF7IP2Q5U623 682 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 CBWD2Q8IUF1 395 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 TMEM139Q8IV31 216 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 SCLT1Q96NL6 688 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 BAG1Q99933 345 aaPredicted RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 FDXACB1Q9BRP7 624 aaPredicted RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 TSEN34Q9BSV6 310 aaKnown RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 MMRN2Q9H8L6 949 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
CLN6-219ENST00000637329 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
CLN6-219ENST00000637329 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 ABLIM1O14639 778 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 OGTO15294 1046 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 ASGR1P07306 291 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 KRT9P35527 623 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 MATR3P43243 847 aaKnown RBP eCLIP16.68■□□□□ 0.26
CLN6-219ENST00000637329 KLK7P49862 253 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 MXI1P50539 228 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 POU5F1Q01860 360 aaKnown RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 PTPN11Q06124 597 aaPredicted RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 PSMD6Q15008 389 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 AMHR2Q16671 573 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 KYAT1Q16773 422 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 FAM213AQ9BRX8 229 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 LSM14BQ9BX40 385 aaKnown RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 GCOM2Q9BZD3 368 aaPredicted RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 PTPRHQ9HD43 1115 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 FAM207AQ9NSI2 230 aaPredicted RBP16.68■□□□□ 0.26
CLN6-219ENST00000637329 MYO6Q9UM54 1294 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 PTCH2Q9Y6C5 1203 aa16.68■□□□□ 0.26
CLN6-219ENST00000637329 KAT6AQ92794 2004 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 HTTP42858 3142 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 GOLGA8IPA6NC78 632 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 GOLGA8JA6NMD2 632 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 FAM189A1O60320 539 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 GPR32O75388 356 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 ERLIN2O94905 339 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 HNRNPH3P31942 346 aaKnown RBP16.67■□□□□ 0.26
CLN6-219ENST00000637329 CHMP4BP1P59074 171 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 CLDN10P78369 228 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 MEA1Q16626 185 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
CLN6-219ENST00000637329 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 ZNF568Q3ZCX4 644 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 RUFY4Q6ZNE9 571 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 APBB1IPQ7Z5R6 666 aaPredicted RBP16.67■□□□□ 0.26
CLN6-219ENST00000637329 RPAINQ86UA6 219 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 BRSK2Q8IWQ3 736 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 CCDC155Q8N6L0 562 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 RDH13Q8NBN7 331 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 CPLX3Q8WVH0 158 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 HAPLN2Q9GZV7 340 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 FAM49AQ9H0Q0 323 aaPredicted RBP16.67■□□□□ 0.26
CLN6-219ENST00000637329 GANQ9H2C0 597 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 MINDY3Q9H8M7 445 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 RBAKQ9NYW8 714 aaPredicted RBP16.67■□□□□ 0.26
CLN6-219ENST00000637329 PYCARDQ9ULZ3 195 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 EVPLQ92817 2033 aa16.67■□□□□ 0.26
CLN6-219ENST00000637329 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
CLN6-219ENST00000637329 TREHO43280 583 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
CLN6-219ENST00000637329 MCF2P10911 925 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 PON1P27169 355 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 HIC1Q14526 733 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 SURF1Q15526 300 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 KCNA10Q16322 511 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 TRIM65Q6PJ69 517 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 CACNA2D4Q7Z3S7 1137 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 RSPH3Q86UC2 560 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 ZSWIM2Q8NEG5 633 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 SYN2Q92777 582 aaPredicted RBP16.66■□□□□ 0.26
CLN6-219ENST00000637329 ZNHIT6Q9NWK9 470 aaKnown RBP16.66■□□□□ 0.26
CLN6-219ENST00000637329 USP20Q9Y2K6 914 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 PTPN22Q9Y2R2 807 aa16.66■□□□□ 0.26
CLN6-219ENST00000637329 A0A0C4DFX4 3053 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 EPHB6O15197 1021 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 B4GALT5O43286 388 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 TSPAN1O60635 241 aa16.65■□□□□ 0.26
CLN6-219ENST00000637329 NOL4O94818 638 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms