RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PLCB2Q00722 1185 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 NR1I3Q14994 352 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 FBXO47Q5MNV8 452 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 ZNF618Q5T7W0 954 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 APTXQ7Z2E3 356 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 CREBRFQ8IUR6 639 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 TRIM59Q8IWR1 403 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 TMEM40Q8WWA1 233 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 ZBTB45Q96K62 511 aaPredicted RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 MFSD14AQ96MC6 490 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 RTN4Q9NQC3 1192 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 USP20Q9Y2K6 914 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 PDE4DIPQ5VU43 2346 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 ARID2Q68CP9 1835 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 A0A1B0GTH6 734 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 AP5Z1O43299 807 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 KRT13P13646 458 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 COPB1P53618 953 aaKnown RBP14.59□□□□□ -0.07
LINC00643-207ENST00000637212 TLE2Q04725 743 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 NOLC1Q14978 699 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00643-207ENST00000637212 SNRNP35Q16560 246 aaKnown RBP14.59□□□□□ -0.07
LINC00643-207ENST00000637212 MAN2A1Q16706 1144 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 DCAF4L1Q3SXM0 396 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 HSP90AA4PQ58FG1 418 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 NOTUMQ6P988 496 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 TRAF7Q6Q0C0 670 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 USP37Q86T82 979 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 DIS3LQ8TF46 1054 aaKnown RBP14.59□□□□□ -0.07
LINC00643-207ENST00000637212 MRFAP1L1Q96HT8 127 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 ADPGKQ9BRR6 497 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 FAM213AQ9BRX8 229 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 NOC4LQ9BVI4 516 aaKnown RBP14.59□□□□□ -0.07
LINC00643-207ENST00000637212 HAPLN2Q9GZV7 340 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 PDZD7Q9H5P4 517 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
LINC00643-207ENST00000637212 STX10O60499 249 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 PQBP1O60828 265 aaKnown RBP14.58□□□□□ -0.08
LINC00643-207ENST00000637212 ADCY5O95622 1261 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 CLTAP09496 248 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 FGFR4P22455 802 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 ZNF75DP51815 510 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 FAAP100Q0VG06 881 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 LPIN1Q14693 890 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 ZNF568Q3ZCX4 644 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 TRIM60Q495X7 471 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 VWA3BQ502W6 1294 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 EEF1DP3Q658K8 133 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 SLC27A1Q6PCB7 646 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 CRELD2Q6UXH1 353 aaPredicted RBP14.58□□□□□ -0.08
LINC00643-207ENST00000637212 LRRC8DQ7L1W4 858 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 UBE2Q1Q7Z7E8 422 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 FAM228AQ86W67 206 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 RDH13Q8NBN7 331 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 NAP1L5Q96NT1 182 aaPredicted RBP14.58□□□□□ -0.08
LINC00643-207ENST00000637212 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 CDT1Q9H211 546 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 ERVK-5Q9HDB9 667 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 IFNKQ9P0W0 207 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
LINC00643-207ENST00000637212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC00643-207ENST00000637212 HTTP42858 3142 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 GOLGA8IPA6NC78 632 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 GOLGA8JA6NMD2 632 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 LGALS16A8MUM7 142 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 FAM189A1O60320 539 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 CTSHP09668 335 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 GTF2H1P32780 548 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 VAMP7P51809 220 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 PSMD6Q15008 389 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 SURF1Q15526 300 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 MIIPQ5JXC2 388 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 ZBTB33Q86T24 672 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 CBWD2Q8IUF1 395 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 SAAL1Q96ER3 474 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 XPO4Q9C0E2 1151 aaKnown RBP14.57□□□□□ -0.08
LINC00643-207ENST00000637212 VPS16Q9H269 839 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 NDST4Q9H3R1 872 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
LINC00643-207ENST00000637212 PADI3Q9ULW8 664 aa14.57□□□□□ -0.08
LINC00643-207ENST00000637212 PMM2O15305 246 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 ADRB2P07550 413 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 STAG3L1P0CL83 205 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 ZSCAN20P17040 1043 aaPredicted RBP14.56□□□□□ -0.08
LINC00643-207ENST00000637212 EN2P19622 333 aaPredicted RBP14.56□□□□□ -0.08
LINC00643-207ENST00000637212 CDC25BP30305 580 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 GRM5P41594 1212 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 ACOT2P49753 483 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 CLDN10P78369 228 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 BFSP1Q12934 665 aa14.56□□□□□ -0.08
LINC00643-207ENST00000637212 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
LINC00643-207ENST00000637212 PAK2Q13177 524 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms