RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 DCLRE1BQ9H816 532 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 TMBIM4Q9HC24 238 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 NCOA3Q9Y6Q9 1424 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 PRAMEP78395 509 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 CTTNQ14247 550 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 RCN1Q15293 331 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 ARHGAP22Q7Z5H3 698 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 MFN1Q8IWA4 741 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 RBM15Q96T37 977 aaKnown RBP eCLIP11.95□□□□□ -0.57e-7■■■■□ 25
SMARCA2-258ENST00000637103 KANSL2Q9H9L4 492 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 SMAPO00193 183 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 VAMP7P51809 220 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 TRAPPC11Q7Z392 1133 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 RHPN2Q8IUC4 686 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 ADSSL1Q8N142 457 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 APOL6Q9BWW8 343 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 UVRAGQ9P2Y5 699 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
SMARCA2-258ENST00000637103 LAMC1P11047 1609 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 SPAG6O75602 509 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 KCNA6P17658 529 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 CDO1Q16878 200 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 GJC2Q5T442 439 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 FRA10AC1Q70Z53 315 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 CLMNQ96JQ2 1002 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ALG13Q9NP73 1137 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 DTNAQ9Y4J8 743 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ANGPT2O15123 496 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 CCND2P30279 289 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ALDH1B1P30837 517 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 TSTA3Q13630 321 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ARMCX2Q7L311 632 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 NLRP10Q86W26 655 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 RCOR2Q8IZ40 523 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ERP44Q9BS26 406 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 TRIM10Q9UDY6 481 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 CPSF3Q9UKF6 684 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ADAMTS12P58397 1594 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 PSAPP07602 524 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 GCLMP48507 274 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 GPR141Q7Z602 305 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 CYGBQ8WWM9 190 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 MAGEB5Q9BZ81 275 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 NGRNQ9NPE2 291 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 UBE4BO95155 1302 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 NUP107P57740 925 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 PRUNE1Q86TP1 453 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 ZNF280CQ8ND82 737 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 SLC35G2Q8TBE7 412 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 MANSC1Q9H8J5 431 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 PARVAQ9NVD7 372 aa11.94□□□□□ -0.5
SMARCA2-258ENST00000637103 XPO1O14980 1071 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 PPP6R3Q5H9R7 873 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 MAGEB18Q96M61 343 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 SYBUQ9NX95 663 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 LEMD3Q9Y2U8 911 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 GYPCP04921 128 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ZNF18P17022 549 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 CDC27P30260 824 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ALX1Q15699 326 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 P3H1Q32P28 736 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 RSRC2Q7L4I2 434 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 PRPF39Q86UA1 669 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 METTL23Q86XA0 190 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ITGB1BP2Q9UKP3 347 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 MED14O60244 1454 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 POTEMA6NI47 508 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 PJA2O43164 708 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 PRLRP16471 622 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ITPRIPL1Q6GPH6 555 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 SCARA5Q6ZMJ2 495 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 SYN2Q92777 582 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 BFARQ9NZS9 450 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 HEY1Q9Y5J3 304 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 TYW5A2RUC4 315 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 H3BQF6 201 aa11.93□□□□□ -0.5
SMARCA2-258ENST00000637103 ABL1P00519 1130 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms