RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 KLRG1Q96E93 195 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 BICD1Q96G01 975 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ZIM3Q96PE6 472 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 AP1M1Q9BXS5 423 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 PDLIM7Q9NR12 457 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 FBXO40Q9UH90 709 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 GOLGA6L10A6NI86 522 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 ZNF862O60290 1169 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 FGGP02679 453 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ICAM3P32942 547 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 GCNT1Q02742 428 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 STRN3Q13033 797 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 LRIG3Q6UXM1 1119 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 SLC20A1Q8WUM9 679 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ARHGEF26Q96DR7 871 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 SAAL1Q96ER3 474 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 RNPC3Q96LT9 517 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 RUNDC3BQ96NL0 473 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 DDX47Q9H0S4 455 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 WNT8AQ9H1J5 351 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 A1CFQ9NQ94 594 aaKnown RBP13.06□□□□□ -0.32
CLN8-212ENST00000637083 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
CLN8-212ENST00000637083 ESYT3A0FGR9 886 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 TULP1O00294 542 aaPredicted RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 STBD1O95210 358 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 LDHAP00338 332 aaKnown RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 BPIFB4P59827 614 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 CDR2Q01850 454 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 PRKCEQ02156 737 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 DHX34Q14147 1143 aaKnown RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 ZNF677Q86XU0 584 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 PLVAPQ9BX97 442 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLN8-212ENST00000637083 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 GTF3C4Q9UKN8 822 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 ALG6Q9Y672 507 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 EXTL3O43909 919 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 SHOX2O60902 331 aaPredicted RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 RGS20O76081 388 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 SGPL1O95470 568 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 CYP11B1P15538 503 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 GBP1P32455 592 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 LIG4P49917 911 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 GUCY2FP51841 1108 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 POLGP54098 1239 aaPredicted RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 PTENP60484 403 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 HELQQ8TDG4 1101 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 SEC14L1Q92503 715 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 KREMEN1Q96MU8 473 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
CLN8-212ENST00000637083 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
CLN8-212ENST00000637083 CYP26A1O43174 497 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
CLN8-212ENST00000637083 PTPROQ16827 1216 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 WDR44Q5JSH3 913 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 PPP1R2P3Q6NXS1 205 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
CLN8-212ENST00000637083 PALB2Q86YC2 1186 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
CLN8-212ENST00000637083 EFCAB13Q8IY85 973 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 C1orf112Q9NSG2 853 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 COG5Q9UP83 839 aa13.04□□□□□ -0.32
CLN8-212ENST00000637083 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
CLN8-212ENST00000637083 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
CLN8-212ENST00000637083 ATG7O95352 703 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 OATP04181 439 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 CYP1A2P05177 515 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 CHRNB2P17787 502 aa13.03□□□□□ -0.32
CLN8-212ENST00000637083 CHRNA3P32297 505 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms