RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 PDZD7Q9H5P4 517 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 TMEM206Q9H813 350 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 GDPD2Q9HCC8 539 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 OLFML3Q9NRN5 406 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 STK39Q9UEW8 545 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 TBX20Q9UMR3 447 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 STXBP5LQ9Y2K9 1186 aa9.01□□□□□ -0.97
PNKP-226ENST00000636840 MRPL42Q9Y6G3 142 aaKnown RBP9.01□□□□□ -0.97
PNKP-226ENST00000636840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
PNKP-226ENST00000636840 C5orf67F2Z3F1 127 aa9□□□□□ -0.97
PNKP-226ENST00000636840 HNRNPDLO14979 420 aaKnown RBP9□□□□□ -0.97
PNKP-226ENST00000636840 ZNF202O95125 648 aa9□□□□□ -0.97
PNKP-226ENST00000636840 KIF20AO95235 890 aa9□□□□□ -0.97
PNKP-226ENST00000636840 GCNT3O95395 438 aa9□□□□□ -0.97
PNKP-226ENST00000636840 THP07101 528 aa9□□□□□ -0.97
PNKP-226ENST00000636840 ATF7P17544 494 aaPredicted RBP9□□□□□ -0.97
PNKP-226ENST00000636840 AKAP5P24588 427 aa9□□□□□ -0.97
PNKP-226ENST00000636840 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
PNKP-226ENST00000636840 GATMP50440 423 aa9□□□□□ -0.97
PNKP-226ENST00000636840 UBE3AQ05086 875 aa9□□□□□ -0.97
PNKP-226ENST00000636840 PSMD2Q13200 908 aa9□□□□□ -0.97
PNKP-226ENST00000636840 HSP90AA2PQ14568 343 aaPredicted RBP9□□□□□ -0.97
PNKP-226ENST00000636840 CLLU1OSQ5K130 101 aa9□□□□□ -0.97
PNKP-226ENST00000636840 CNNM4Q6P4Q7 775 aa9□□□□□ -0.97
PNKP-226ENST00000636840 KCNT2Q6UVM3 1135 aa9□□□□□ -0.97
PNKP-226ENST00000636840 AGMOQ6ZNB7 445 aa9□□□□□ -0.97
PNKP-226ENST00000636840 UNC13DQ70J99 1090 aa9□□□□□ -0.97
PNKP-226ENST00000636840 ZBTB33Q86T24 672 aa9□□□□□ -0.97
PNKP-226ENST00000636840 SFR1Q86XK3 245 aa9□□□□□ -0.97
PNKP-226ENST00000636840 TMEM87AQ8NBN3 555 aa9□□□□□ -0.97
PNKP-226ENST00000636840 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
PNKP-226ENST00000636840 MICAL1Q8TDZ2 1067 aa9□□□□□ -0.97
PNKP-226ENST00000636840 LRRC15Q8TF66 581 aa9□□□□□ -0.97
PNKP-226ENST00000636840 TMEM169Q96HH4 297 aa9□□□□□ -0.97
PNKP-226ENST00000636840 GBP3Q9H0R5 595 aa9□□□□□ -0.97
PNKP-226ENST00000636840 RC3H2Q9HBD1 1191 aaKnown RBP9□□□□□ -0.97
PNKP-226ENST00000636840 SNTG2Q9NY99 539 aa9□□□□□ -0.97
PNKP-226ENST00000636840 SPG21Q9NZD8 308 aa9□□□□□ -0.97
PNKP-226ENST00000636840 HPSEQ9Y251 543 aa9□□□□□ -0.97
PNKP-226ENST00000636840 FAN1Q9Y2M0 1017 aa9□□□□□ -0.97
PNKP-226ENST00000636840 MYH11P35749 1972 aa9□□□□□ -0.97
PNKP-226ENST00000636840 LAMA2P24043 3122 aaKnown RBP9□□□□□ -0.97
PNKP-226ENST00000636840 SIP14410 1827 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 FAM237AA0A1B0GTK4 181 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 ARL5CA6NH57 179 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GOLGA6L22H0YM25 854 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 RFXAPO00287 272 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 XPOTO43592 962 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.97
PNKP-226ENST00000636840 LDHAP00338 332 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 POMCP01189 267 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 PIGRP01833 764 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 CLTAP09496 248 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 HARSP12081 509 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 POU3F3P20264 500 aaPredicted RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 GRM5P41594 1212 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 NDUFA8P51970 172 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 NOLC1Q14978 699 aaKnown RBP eCLIP8.99□□□□□ -0.97
PNKP-226ENST00000636840 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 EEF1DP3Q658K8 133 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 KRBA2Q6ZNG9 492 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 MAP4K3Q8IVH8 894 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 COLGALT1Q8NBJ5 622 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GUCD1Q96NT3 240 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GAD1Q99259 594 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 TMEM175Q9BSA9 504 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 MSTO1Q9BUK6 570 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 COLEC11Q9BWP8 271 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GTPBP4Q9BZE4 634 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 NXF3Q9H4D5 531 aaKnown RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 CWH43Q9H720 699 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 RNF19AQ9NV58 838 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 EXOC1Q9NV70 894 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 TBC1D13Q9NVG8 400 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 TBC1D7Q9P0N9 293 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 ANKFY1Q9P2R3 1169 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 PLAGL2Q9UPG8 496 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GDAQ9Y2T3 454 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 HES2Q9Y543 173 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.99□□□□□ -0.97
PNKP-226ENST00000636840 TCHHQ07283 1943 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 MYH15Q9Y2K3 1946 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 ZMYM2Q9UBW7 1377 aa8.99□□□□□ -0.97
PNKP-226ENST00000636840 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 KIAA0391O15091 583 aaKnown RBP8.98□□□□□ -0.97
PNKP-226ENST00000636840 OGTO15294 1046 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 NCK2O43639 380 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 FGF18O76093 207 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 ARHGEF15O94989 841 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 SMC2O95347 1197 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 MLH1P40692 756 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 OR1G1P47890 313 aa8.98□□□□□ -0.97
PNKP-226ENST00000636840 BCAR1P56945 870 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms