RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.07■□□□□ 0
CACNA1A-228ENST00000636610 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
CACNA1A-228ENST00000636610 SCN9AQ15858 1988 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 PHF2O75151 1096 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 FSBPO95073 299 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 APBA3O96018 575 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 RARRES1P49788 294 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 ZNF131P52739 623 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 KIF22Q14807 665 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 C6orf89Q6UWU4 347 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 HVCN1Q96D96 273 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 NAP1L3Q99457 506 aaPredicted RBP15.07■□□□□ 0
CACNA1A-228ENST00000636610 MXRA8Q9BRK3 442 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 FZD1Q9UP38 647 aa15.07■□□□□ 0
CACNA1A-228ENST00000636610 PIK3CDO00329 1044 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 DRD4P21917 467 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 YWHABP31946 246 aaKnown RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 CHKAP35790 457 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 PTGIRP43119 386 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 RASA3Q14644 834 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 PPP2R5AQ15172 486 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 AGBL2Q5U5Z8 902 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 BTNL9Q6UXG8 535 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 INTS8Q75QN2 995 aaKnown RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 PNMA8AQ86V59 439 aaPredicted RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 TAB3Q8N5C8 712 aaPredicted RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 HERPUD2Q9BSE4 406 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SERPINA10Q9UK55 444 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 TMX2Q9Y320 296 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ADSSP30520 456 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SCTRP47872 440 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SNRNP35Q16560 246 aaKnown RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 KYNUQ16719 465 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ANKRD20A8PQ5CZ79 823 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 RNF207Q6ZRF8 634 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 HOOK3Q86VS8 718 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 RHOT2Q8IXI1 618 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 TCP11Q8WWU5 503 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ACCSQ96QU6 501 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 TAAR1Q96RJ0 339 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 ANAPC7Q9UJX3 599 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 RASGRF2O14827 1237 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 FMO1Q01740 532 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 DLGAP5Q15398 846 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SGO2Q562F6 1265 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 PAIP2Q9BPZ3 127 aaKnown RBP15.06■□□□□ 0
CACNA1A-228ENST00000636610 ADAM7Q9H2U9 754 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ODF2LQ9ULJ1 636 aa15.06■□□□□ 0
CACNA1A-228ENST00000636610 ECM2O94769 699 aaPredicted RBP15.05■□□□□ 0
CACNA1A-228ENST00000636610 PEX5P50542 639 aa15.05■□□□□ 0
CACNA1A-228ENST00000636610 MTMR1Q13613 665 aa15.05■□□□□ 0
CACNA1A-228ENST00000636610 SLC15A2Q16348 729 aa15.05■□□□□ 0
CACNA1A-228ENST00000636610 HIBCHQ6NVY1 386 aaPredicted RBP15.05■□□□□ 0
CACNA1A-228ENST00000636610 SLC13A5Q86YT5 568 aaPredicted RBP15.05■□□□□ 0
CACNA1A-228ENST00000636610 KIRREL3Q8IZU9 778 aa15.05■□□□□ 0
CACNA1A-228ENST00000636610 SEC14L1Q92503 715 aa15.05■□□□□ 0
CACNA1A-228ENST00000636610 MTRF1LQ9UGC7 380 aaKnown RBP15.05■□□□□ 0
CACNA1A-228ENST00000636610 LOC102724159A0A0B4J2E5 919 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 RTN2O75298 545 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 PIAS1O75925 651 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 GH1P01241 217 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 CLTAP09496 248 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 HARSP12081 509 aaKnown RBP15.05■□□□□ -0
CACNA1A-228ENST00000636610 CYP11B1P15538 503 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 COILP38432 576 aaPredicted RBP15.05■□□□□ -0
CACNA1A-228ENST00000636610 MRPS9P82933 396 aaKnown RBP15.05■□□□□ -0
CACNA1A-228ENST00000636610 KRT17Q04695 432 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 PWP2Q15269 919 aaKnown RBP15.05■□□□□ -0
CACNA1A-228ENST00000636610 SEZ6Q53EL9 994 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 SLC27A3Q5K4L6 730 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 TBC1D1Q86TI0 1168 aaPredicted RBP15.05■□□□□ -0
CACNA1A-228ENST00000636610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.05■□□□□ -0
CACNA1A-228ENST00000636610 POMGNT1Q8WZA1 660 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 BICD1Q96G01 975 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 SYNGAP1Q96PV0 1343 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 SEL1LQ9UBV2 794 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 BAIAP2L1Q9UHR4 511 aa15.05■□□□□ -0
CACNA1A-228ENST00000636610 DENND3A2RUS2 1198 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 P4HBP07237 508 aaKnown RBP15.04■□□□□ -0
CACNA1A-228ENST00000636610 CFHP08603 1231 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 CALCOCO2Q13137 446 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 ERMARDQ5T6L9 678 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 CYFIP1Q7L576 1253 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 TLCD1Q96CP7 247 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 NOCTQ9UK39 431 aaKnown RBP15.04■□□□□ -0
CACNA1A-228ENST00000636610 RIPK2O43353 540 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 CNGA1P29973 690 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 CHRNA3P32297 505 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
CACNA1A-228ENST00000636610 TKFCQ3LXA3 575 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 EMC10Q5UCC4 262 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
CACNA1A-228ENST00000636610 C9orf72Q96LT7 481 aa15.04■□□□□ -0
CACNA1A-228ENST00000636610 CEP89Q96ST8 783 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms