RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 B4GALT7Q9UBV7 327 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 Q9UF83 564 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 SFMBT1Q9UHJ3 866 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 PUF60Q9UHX1 559 aaKnown RBP-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 RARRES3Q9UL19 164 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 ZNRF3Q9ULT6 936 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 CARHSP1Q9Y2V2 147 aaKnown RBP-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 ENTPD2Q9Y5L3 495 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 MAGED1Q9Y5V3 778 aaPredicted RBP-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 FPGT-TNNI3KV9GXZ4 949 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 RPTORQ8N122 1335 aa-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF646O15015 1829 aaPredicted RBP-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 PTPRZ1P23471 2315 aaPredicted RBP-0.71□□□□□ -2.52
CDKL5-210ENST00000636046 BDP1A6H8Y1 2624 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 IGKV3D-11A0A0A0MRZ8 115 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PP55 124 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQ45 241 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQY0 241 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TESPA1A2RU30 521 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 UNCXA6NJT0 531 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SRRM5B3KS81 715 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MYO1FO00160 1098 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CDX4O14627 284 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TRIM24O15164 1050 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 KCNN4O15554 427 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 DFNA5O60443 496 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TULP3O75386 442 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 LRIG2O94898 1065 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 AMBPP02760 352 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CKMP06732 381 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 F7P08709 466 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ITGAMP11215 1152 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ATP6V1B1P15313 513 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 NPR3P17342 541 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 FDXRP22570 491 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SHC1P29353 583 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CYP2C18P33260 490 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 RDXP35241 583 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ADCY8P40145 1251 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 PTGER3P43115 390 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ME1P48163 572 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 IDH3AP50213 366 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ERFP50548 548 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 NR0B1P51843 470 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 RABGGTBP53611 331 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 IST1P53990 364 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 EPHA5P54756 1037 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 IRX1P78414 480 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 EGR4Q05215 589 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 EEF1A2Q05639 463 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MEF2CQ06413 473 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 DGKZQ13574 1117 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TP53BP2Q13625 1128 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MOGSQ13724 837 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ELAVL1Q15717 326 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 DDB1Q16531 1140 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 KIZQ2M2Z5 673 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TMEM30BQ3MIR4 351 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZMAT1Q5H9K5 638 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 PRAMEF19Q5SWL8 479 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 LETMD1Q6P1Q0 360 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 FBXL19Q6PCT2 694 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SPATA8Q6RVD6 105 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 NXPE4Q6UWF7 544 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 METTL7BQ6UX53 244 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MFSD7Q6UXD7 560 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZPBP2Q6X784 338 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SLC39A5Q6ZMH5 540 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 INTS8Q75QN2 995 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CDC37L1Q7L3B6 337 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 UBE3DQ7Z6J8 389 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CALHM3Q86XJ0 350 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 P3H2Q8IVL5 708 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SLC39A11Q8N1S5 342 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZCCHC24Q8N2G6 241 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SRBD1Q8N5C6 995 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 NKAPQ8N5F7 415 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 RFLNBQ8N5W9 214 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 CEP120Q8N960 986 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 RNF214Q8ND24 703 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 Q8NDZ9 215 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF548Q8NEK5 533 aaPredicted RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 OR13H1Q8NG92 308 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 AENQ8WTP8 325 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZNRF4Q8WWF5 429 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SPOCK2Q92563 424 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 KLHL29Q96CT2 875 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 SGF29Q96ES7 293 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF799Q96GE5 643 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 PEX11GQ96HA9 241 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MPP4Q96JB8 637 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 Q96MF0 132 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 COL21A1Q96P44 957 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 WRNIP1Q96S55 665 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 MGME1Q9BQP7 344 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TM6SF1Q9BZW5 370 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 AKIP1Q9NQ31 210 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 PDLIM7Q9NR12 457 aa-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 TLR8Q9NR97 1041 aaKnown RBP-0.72□□□□□ -2.52
CDKL5-210ENST00000636046 DONSONQ9NYP3 566 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms