RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 PTPRZ1P23471 2315 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 RPA1P27694 616 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 STX2P32856 288 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SARNPP82979 210 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SMAD1Q15797 465 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 DUOXA2Q1HG44 320 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 RWDD4Q6NW29 188 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 TLK2Q86UE8 772 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 CCT6BQ92526 530 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 TINF2Q9BSI4 451 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 PCDHB7Q9Y5E2 793 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 F5H423 210 aaPredicted RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 TLR2O60603 784 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SLC9A1P19634 815 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 PAN2Q504Q3 1202 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 VSIG1Q86XK7 387 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 CABS1Q96KC9 395 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SMYD2Q9NRG4 433 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 HEY1Q9Y5J3 304 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SLIT3O75094 1523 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 A8MXQ7 604 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 INHAP05111 366 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 CCL23P55773 120 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 ACVR2BQ13705 512 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 CXCL17Q6UXB2 119 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 SAPCD2Q86UD0 394 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 GRK7Q8WTQ7 553 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 AFG1LQ8WV93 481 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 KIAA1586Q9HCI6 787 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 HSPBP1Q9NZL4 362 aa15.3■□□□□ 0.04
NEDD4L-238ENST00000635997 ALDH3A1P30838 453 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 CACNB2Q08289 660 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 GPD1LQ8N335 351 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 SLC30A5Q8TAD4 765 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 TRIM11Q96F44 468 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 SNX9Q9Y5X1 595 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ICAM1P05362 532 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 MTMR3Q13615 1198 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 KCNB1Q14721 858 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 BBS9Q3SYG4 887 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 TAOK1Q7L7X3 1001 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 PGBD4Q96DM1 585 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 CHORDC1Q9UHD1 332 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 RRN3P2A6NIE6 340 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 GNA15P30679 374 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ALDH7A1P49419 539 aaKnown RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ATP11AP98196 1134 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 TSTA3Q13630 321 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 PFDN4Q9NQP4 134 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 MED24O75448 989 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 PTPAQ15257 358 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 PPP2R5EQ16537 467 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 CCDC13Q8IYE1 715 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 BEST2Q8NFU1 509 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 ZNF296Q8WUU4 475 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 SKA2Q8WVK7 121 aaPredicted RBP15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
NEDD4L-238ENST00000635997 M0QYV0 167 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 SH3BP5O60239 455 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 PKN1Q16512 942 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 CEP128Q6ZU80 1094 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 TTC7AQ9ULT0 858 aaPredicted RBP15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 ADGRG1Q9Y653 693 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 ESYT3A0FGR9 886 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 PDXKO00764 312 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 MCF2LO15068 1137 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 ABCD1P33897 745 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 ACTR2P61160 394 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 PRKCZQ05513 592 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 EMC2Q15006 297 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 TMC7Q7Z402 723 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 GOLGA4Q13439 2230 aaKnown RBP15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 MAGEB2O15479 319 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 CABYRO75952 493 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 RHOBTB3O94955 611 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
NEDD4L-238ENST00000635997 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms