RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SYBUQ9NX95 663 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SMARCAL1Q9NZC9 954 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SYNCRIPO60506 623 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RASSF9O75901 435 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 HOXA13P31271 388 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 NPY2RP49146 381 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 AP3M2P53677 418 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SLC16A1P53985 500 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 DYNC1I2Q13409 638 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CUL4AQ13619 759 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF394Q53GI3 561 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SRLQ86TD4 932 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LGR6Q9HBX8 967 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 IARS2Q9NSE4 1012 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 FANCLQ9NW38 375 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RPS6KB2Q9UBS0 482 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RAB23Q9ULC3 237 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ABCA10Q8WWZ4 1543 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 EIF4E1BA6NMX2 242 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 MYBL1P10243 752 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 IRF1P10914 325 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LCP1P13796 627 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ADORA2BP29275 332 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 GUCY1A2P33402 732 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PRELPP51888 382 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CNTN1Q12860 1018 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 AP3B2Q13367 1082 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 KLHL24Q6TFL4 600 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ZC3H18Q86VM9 953 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC60Q8IWA6 550 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 AGBL1Q96MI9 1066 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 THAP9Q9H5L6 903 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PARVBQ9HBI1 364 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ENTPD7Q9NQZ7 604 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RWDD2AQ9UIY3 292 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CFAP43Q8NDM7 1665 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PFKFB2O60825 505 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 KRT76Q01546 638 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 TWF1Q12792 350 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 KRT24Q2M2I5 525 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 UGT3A1Q6NUS8 523 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM270Q6UE05 265 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ADCK1Q86TW2 530 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 KIAA2013Q8IYS2 634 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 DTX3LQ8TDB6 740 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PRPF18Q99633 342 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LATS2Q9NRM7 1088 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 MRGBPQ9NV56 204 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RASA4BC9J798 803 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 USP17L10C9JJH3 530 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RASA4O43374 803 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 GRIN3BO60391 1043 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CIAO1O76071 339 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 GNA15P30679 374 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 HIRAP54198 1017 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CACNB2Q08289 660 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LLGL1Q15334 1064 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PTRHD1Q6GMV3 140 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 HDDC2Q7Z4H3 204 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 MYLK2Q9H1R3 596 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SLC38A7Q9NVC3 462 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SATB2Q9UPW6 733 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHA13Q9Y5I0 950 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 BTBD18B2RXH4 712 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PSMD12O00232 456 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ADCY3O60266 1144 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 RARBP10826 455 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 GRK3P35626 688 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC41Q15345 812 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 MAPRE1Q15691 268 aaKnown RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 DUOXA2Q1HG44 320 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC8AQ8IWT6 810 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ZBED8Q8IZ13 594 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PIGSQ96S52 555 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 ORAI2Q96SN7 254 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 NFKBIZQ9BYH8 718 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 BRD8Q9H0E9 1235 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 COPS7BQ9H9Q2 264 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 PLEKHA5Q9HAU0 1116 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 FAM217BQ9NTX9 383 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-209ENST00000635750 SLC39A10Q9ULF5 831 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 FHOD1Q9Y613 1164 aa5.86□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC189A1A4V9 331 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MMEP08473 750 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF24P17028 368 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 RALGDSQ12967 914 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CTTNQ14247 550 aaKnown RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 G2E3Q7L622 706 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MMGT1Q8N4V1 131 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ZSCAN18Q8TBC5 510 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 USP6NLQ92738 828 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ADNPQ9H2P0 1102 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 KLHL11Q9NVR0 708 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 NSMCE4AQ9NXX6 385 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 SPASTQ9UBP0 616 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms