RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 SOD2P04179 222 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 SPATA31D3P0C874 917 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 GBP2P32456 591 aaPredicted RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 NCBP1Q09161 790 aaKnown RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 NBR1Q14596 966 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 EMC2Q15006 297 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 SPATA31D4Q6ZUB0 917 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 FRMD5Q7Z6J6 570 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 MTRQ99707 1265 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 MIOSQ9NXC5 875 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 SSX2IPQ9Y2D8 614 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 HES2Q9Y543 173 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 IPPQ9Y573 584 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 PCDHB6Q9Y5E3 794 aa17.25■□□□□ 0.35
SNRNP48-203ENST00000634363 ARL5CA6NH57 179 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 INO80B-WBP1J3KQ70 363 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 ADH1AP07327 375 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 MLH1P40692 756 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 NBL1P41271 181 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 TOB1P50616 345 aaPredicted RBP17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 BECN1Q14457 450 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 PALB2Q86YC2 1186 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 SIX5Q8N196 739 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 RSAD2Q8WXG1 361 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 PPME1Q9Y570 386 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
SNRNP48-203ENST00000634363 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 F8W810 466 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 LAD1O00515 517 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 TEX28O15482 410 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 STX6O43752 255 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 NARSO43776 548 aaKnown RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 GAS2O43903 313 aaKnown RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 NR1I2O75469 434 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 CFHP08603 1231 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 GLUD2P49448 558 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 SCNN1GP51170 649 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 CWF19L1Q69YN2 538 aaKnown RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 NOTUMQ6P988 496 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 NKD2Q969F2 451 aaPredicted RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 ZFP42Q96MM3 310 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 TRIM6Q9C030 488 aaPredicted RBP17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 PIDD1Q9HB75 910 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 DUSP12Q9UNI6 340 aa17.23■□□□□ 0.35
SNRNP48-203ENST00000634363 USP34Q70CQ2 3546 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 INPPL1O15357 1258 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 TSPAN1O60635 241 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 N4BP1O75113 896 aaKnown RBP17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 RFPL2O75678 378 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 GLUD1P00367 558 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 NPR3P17342 541 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 AOC1P19801 751 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 RFX1P22670 979 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 AXLP30530 894 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 PTENP60484 403 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 PTGDRQ13258 359 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 TFDP1Q14186 410 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 MXD4Q14582 209 aaPredicted RBP17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 KIAA0319Q5VV43 1072 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 ELMSAN1Q6PJG2 1045 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 COLEC11Q9BWP8 271 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 RAB34Q9BZG1 259 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 IGSF9Q9P2J2 1179 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 DPP7Q9UHL4 492 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 MTMR6Q9Y217 621 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 CACNA1HO95180 2353 aa17.22■□□□□ 0.35
SNRNP48-203ENST00000634363 A0A087WWV3 80 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 POTEMA6NI47 508 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 SLITRK3O94933 977 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 AKAP5P24588 427 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 CDR2LQ86X02 465 aaPredicted RBP17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 ERMNQ8TAM6 284 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 STAMQ92783 540 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 EIF2AK1Q9BQI3 630 aaKnown RBP17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 RTP3Q9BQQ7 232 aa17.21■□□□□ 0.35
SNRNP48-203ENST00000634363 CSRNP2Q9H175 543 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms