RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 PXDNLA1KZ92 1463 aa6.91□□□□□ -1.3
LINC00254-202ENST00000633813 ITGB4P16144 1822 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 CBX4O00257 560 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 TRAF5O00463 557 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 GAS7O60861 476 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 KNG1P01042 644 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 IGHDP01880 384 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 MMEP08473 750 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 POU3F2P20265 443 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 HMGB2P26583 209 aaKnown RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 PIP4K2AP48426 406 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 KIF11P52732 1056 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 NFIXQ14938 502 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 SEC23AQ15436 765 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 GIMAP6Q6P9H5 292 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 PTF1AQ7RTS3 328 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 KIF18BQ86Y91 864 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 RPAP2Q8IXW5 612 aaPredicted RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 ASB15Q8WXK1 588 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
LINC00254-202ENST00000633813 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 MEIS3Q99687 375 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 ORAI3Q9BRQ5 295 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 USP44Q9H0E7 712 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 HDAC5Q9UQL6 1122 aa6.9□□□□□ -1.3
LINC00254-202ENST00000633813 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.31
LINC00254-202ENST00000633813 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
LINC00254-202ENST00000633813 KPNA6O60684 536 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 IL18BPO95998 194 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 GNAI2P04899 355 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 COL6A1P12109 1028 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 HSD3B2P26439 372 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 CRKLP46109 303 aaKnown RBP6.89□□□□□ -1.31
LINC00254-202ENST00000633813 FNTBP49356 437 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
LINC00254-202ENST00000633813 ITPK1Q13572 414 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
LINC00254-202ENST00000633813 CALML6Q8TD86 181 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 BTBD2Q9BX70 525 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 UCKL1Q9NWZ5 548 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 FBXO10Q9UK96 956 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 ZBTB1Q9Y2K1 713 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 C5P01031 1676 aa6.89□□□□□ -1.31
LINC00254-202ENST00000633813 UTYO14607 1347 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 ERVV-1B6SEH8 477 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 PLSCR1O15162 318 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 CUTAO60888 179 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 KLHL18O94889 574 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 CYP17A1P05093 508 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 IGKV5-2P06315 115 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 UBTFL1P0CB47 393 aaPredicted RBP6.88□□□□□ -1.31
LINC00254-202ENST00000633813 MC4RP32245 332 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
LINC00254-202ENST00000633813 SURF1Q15526 300 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 WDR72Q3MJ13 1102 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 KIF6Q6ZMV9 814 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 REXO1L1PQ8IX06 675 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 ANKRD44Q8N8A2 993 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 MYD88Q99836 296 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 ADAM7Q9H2U9 754 aa6.88□□□□□ -1.31
LINC00254-202ENST00000633813 C9orf78Q9NZ63 289 aaPredicted RBP6.88□□□□□ -1.31
LINC00254-202ENST00000633813 CCNL1Q9UK58 526 aaPredicted RBP6.88□□□□□ -1.31
LINC00254-202ENST00000633813 MAP3K15Q6ZN16 1313 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 GRM8O00222 908 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 HMMRO75330 724 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 NBPF7P0C2Y1 421 aaPredicted RBP6.87□□□□□ -1.31
LINC00254-202ENST00000633813 CNR2P34972 360 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 ECE1P42892 770 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 TCIRG1Q13488 830 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 GCKRQ14397 625 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 HSP90AB3PQ58FF7 597 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 CEP85Q6P2H3 762 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 Q6ZUG5 572 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 GCC1Q96CN9 775 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 TARS2Q9BW92 718 aaKnown RBP6.87□□□□□ -1.31
LINC00254-202ENST00000633813 ZDHHC9Q9Y397 364 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 LAMB4A4D0S4 1761 aa6.87□□□□□ -1.31
LINC00254-202ENST00000633813 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms