RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 CAPN2P17655 700 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 CDK11BP21127 795 aaKnown RBP15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 PSMC2P35998 433 aaKnown RBP15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 TNFSF9P41273 254 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 ZNF75DP51815 510 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 DSC3Q14574 896 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 NR1I3Q14994 352 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 SLFN12LQ6IEE8 588 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 TMEM192Q8IY95 271 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 FAM186BQ8IYM0 893 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 CEP120Q8N960 986 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 TUBGCP2Q9BSJ2 902 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 XPO4Q9C0E2 1151 aaKnown RBP15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 TMX1Q9H3N1 280 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 ANKFY1Q9P2R3 1169 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 AGO2Q9UKV8 859 aaKnown RBP15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 TBX21Q9UL17 535 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 ST3GAL5Q9UNP4 418 aa15.51■□□□□ 0.07
PHACTR4-209ENST00000633371 M0QZ92 97 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 MAPK13O15264 365 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 OGTO15294 1046 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 CLDN3O15551 220 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 EXTL3O43909 919 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 MGEA5O60502 916 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 GHRP10912 638 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 CD52P31358 61 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 ACOT2P49753 483 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 TPM4P67936 248 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 SPAG1Q07617 926 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 NOLC1Q14978 699 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 NECAB2Q7Z6G3 386 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 FAM114A1Q8IWE2 563 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 GPD1LQ8N335 351 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 CAGE1Q8TC20 777 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 VPS16Q9H269 839 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 PADI3Q9ULW8 664 aa15.5■□□□□ 0.07
PHACTR4-209ENST00000633371 MROH7Q68CQ1 1323 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 N4BP3O15049 544 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 NBNO60934 754 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 RPS6KA5O75582 802 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 ERLIN2O94905 339 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 ADCY5O95622 1261 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 GNA14O95837 355 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 MCF2P10911 925 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 SELPP16109 830 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 SFPQP23246 707 aaKnown RBP eCLIP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 AXLP30530 894 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 PBX1P40424 430 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 MTIF2P46199 727 aaKnown RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 UBASH3AP57075 661 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 DLG4P78352 724 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 CYP24A1Q07973 514 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 SNRNP35Q16560 246 aaKnown RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 SLC35C1Q96A29 364 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 WNT8AQ9H1J5 351 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 MAGEC2Q9UBF1 373 aaPredicted RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 CPSF3Q9UKF6 684 aaKnown RBP15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 ATP11BQ9Y2G3 1177 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
PHACTR4-209ENST00000633371 MICAL3Q7RTP6 2002 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 LGALS16A8MUM7 142 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 DCDC2CA8MYV0 355 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 KIAA0391O15091 583 aaKnown RBP15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 TLR3O15455 904 aaKnown RBP15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 NPTXRO95502 500 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 SERPINC1P01008 464 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 BFSP2Q13515 415 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 MAN2A1Q16706 1144 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 COL13A1Q5TAT6 717 aaPredicted RBP15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 LRRC8DQ7L1W4 858 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 THNSL1Q8IYQ7 743 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 CCDC155Q8N6L0 562 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 LINC01599Q8WXQ3 324 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 ZNF516Q92618 1163 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 TRIM5Q9C035 493 aa15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 METTL14Q9HCE5 456 aaKnown RBP15.48■□□□□ 0.07
PHACTR4-209ENST00000633371 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms