RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 BROXQ5VW32 411 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 C1QL3Q5VWW1 255 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MBNL2Q5VZF2 373 aaKnown RBP4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LRRC55Q6ZSA7 311 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 DDX46Q7L014 1031 aaKnown RBP4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RHOUQ7L0Q8 258 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RNF180Q86T96 592 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ZNF276Q8N554 614 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SNX33Q8WV41 574 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FDXACB1Q9BRP7 624 aaPredicted RBP4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SLC46A2Q9BY10 475 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 NCDNQ9UBB6 729 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TMPRSS11EQ9UL52 423 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 HDAC5Q9UQL6 1122 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PRKAB1Q9Y478 270 aa4.08□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PJA2O43164 708 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 HSP90B1P14625 803 aaKnown RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 BLOC1S1P78537 153 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MRPS9P82933 396 aaKnown RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SLC25A3Q00325 362 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MGAT5Q09328 741 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LY6G5CQ5SRR4 150 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ZNF362Q5T0B9 420 aaPredicted RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 GPRIN1Q7Z2K8 1008 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 THNSL2Q86YJ6 484 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MB21D1Q8N884 522 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 OR5M3Q8NGP4 307 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ZNF480Q8WV37 535 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 BBC3Q96PG8 261 aaPredicted RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CDC5LQ99459 802 aaKnown RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ING3Q9NXR8 418 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 EVLQ9UI08 416 aaPredicted RBP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 USP18Q9UMW8 372 aa4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.07□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PRR5-ARHGAP8B1AHC4 643 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RPS6KA4O75676 772 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SPATA31D3P0C874 917 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CDK4P11802 303 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ENPP1P22413 925 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FLT3LGP49771 235 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SPATA31D4Q6ZUB0 917 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PLXDC1Q8IUK5 500 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ELOA2Q8IYF1 753 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CHAC2Q8WUX2 184 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LEO1Q8WVC0 666 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SSH1Q8WYL5 1049 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MYEOVQ96EZ4 313 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ORAI2Q96SN7 254 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CPPED1Q9BRF8 314 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 NDC1Q9BTX1 674 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 EPC1Q9H2F5 836 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 NRDE2Q9H7Z3 1164 aa4.06□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RPTORQ8N122 1335 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ZAR1LA6NP61 321 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PROB1E7EW31 1015 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CD38P28907 300 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 BMPR1AP36894 532 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 GYS2P54840 703 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MXRA7P84157 204 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 APBA1Q02410 837 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ACAP1Q15027 740 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PTPAQ15257 358 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 UGT8Q16880 541 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 C21orf62-AS1Q17RA5 79 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PITRM1Q5JRX3 1037 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MRGPREQ86SM8 312 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LYSMD2Q8IV50 215 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MSL3Q8N5Y2 521 aaKnown RBP4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 AUTS2Q8WXX7 1259 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FAM193BQ96PV7 902 aaPredicted RBP4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 KCNH6Q9H252 994 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 KCTD10Q9H3F6 313 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PACSIN3Q9UKS6 424 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 HS3ST4Q9Y661 456 aa4.05□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RNASET2O00584 256 aaKnown RBP4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 PRAMEF4O60810 478 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TMEM127O75204 238 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ABHD16AO95870 558 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 HLA-DOAP06340 250 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 VIL1P09327 827 aaKnown RBP4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 RBP3P10745 1247 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 LAG3P18627 525 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CTSSP25774 331 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CASRP41180 1078 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 UBE3CQ15386 1083 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 MST1LQ2TV78 715 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 CCDC62Q6P9F0 684 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 KCNV1Q6PIU1 500 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 KRT26Q7Z3Y9 468 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ADGRG3Q86Y34 549 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 ZFP28Q8NHY6 868 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 BCO1Q9HAY6 547 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 GPRC5DQ9NZD1 345 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 FAM30AQ9NZY2 134 aa4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 EIF2B4Q9UI10 523 aaKnown RBP4.04□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TMEM200CA6NKL6 621 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 K7ESF4 209 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 TEX33O43247 280 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 STC2O76061 302 aa4.03□□□□□ -1.76
NPHP3-ACAD11-202ENST00000632629 SNRPA1P09661 255 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms