RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 EPN3Q9H201 632 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 COG5Q9UP83 839 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 NFS1Q9Y697 457 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 PHIPQ8WWQ0 1821 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 TISP43B9A030 160 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 BACH1O14867 736 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DKC1O60832 514 aaKnown RBP eCLIP8.69□□□□□ -1.027e-13■■■■□ 22.5
GPC3-204ENST00000631057 PHF2O75151 1096 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 PPFIA2O75334 1257 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 ADRB2P07550 413 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 MYCLP12524 364 aaPredicted RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 VCAM1P19320 739 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 EIF2AK2P19525 551 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 GTF2H1P32780 548 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 USP8P40818 1118 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DRG2P55039 364 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 EIF3BP55884 814 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 PEX3P56589 373 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 ENPEPQ07075 957 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 ZNF844Q08AG5 666 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DMP1Q13316 513 aaPredicted RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 PGM5Q15124 567 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 SNRNP35Q16560 246 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 PTGISQ16647 500 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 XKR9Q5GH70 373 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 FAM102BQ5T8I3 360 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 SEL1L2Q5TEA6 688 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DUPD1Q68J44 220 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 TTC19Q6DKK2 380 aaPredicted RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 MICALCLQ6ZW33 695 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 CPXCR1Q8N123 301 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 TMC2Q8TDI7 906 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 EPS8L1Q8TE68 723 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 SHC3Q92529 594 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 RUNDC3BQ96NL0 473 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 FMO2Q99518 471 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 ZSWIM1Q9BR11 485 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 ERP44Q9BS26 406 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 NEUROG2Q9H2A3 272 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 DPH5Q9H2P9 285 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 RAVER2Q9HCJ3 691 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 HOMER2Q9NSB8 354 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
GPC3-204ENST00000631057 ALG6Q9Y672 507 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 FAM169AQ9Y6X4 670 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 RLFQ13129 1914 aa8.69□□□□□ -1.02
GPC3-204ENST00000631057 CCDC169A6NNP5 214 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 WNT10BO00744 389 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 SGPL1O95470 568 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CYP1A2P05177 515 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CHRNB2P17787 502 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CCND2P30279 289 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CHRNA3P32297 505 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 GPC3P51654 580 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CDR1P51861 262 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TGFB2P61812 414 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 RPS6P62753 249 aaKnown RBP8.68□□□□□ -1.02
GPC3-204ENST00000631057 GUCY1A3Q02108 690 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 SPP2Q13103 211 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 RASA3Q14644 834 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 UGCGQ16739 394 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 NAA35Q5VZE5 725 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 KRT39Q6A163 491 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 ZNF746Q6NUN9 644 aaPredicted RBP8.68□□□□□ -1.02
GPC3-204ENST00000631057 OTUD6AQ7L8S5 288 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 HOOK3Q86VS8 718 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PPM1KQ8N3J5 372 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TMEM161BQ8NDZ6 487 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 ATP8B4Q8TF62 1192 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 ALG3Q92685 438 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 FAM81BQ96LP2 452 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 NT5C1BQ96P26 610 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TAAR1Q96RJ0 339 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 RMDN3Q96TC7 470 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PDCD2LQ9BRP1 358 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TRIM51Q9BSJ1 452 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PAGR1Q9BTK6 254 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 CENPHQ9H3R5 247 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 C17orf75Q9HAS0 396 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TMEM8AQ9HCN3 771 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PXMP2Q9NR77 195 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 UVRAGQ9P2Y5 699 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 PARP2Q9UGN5 583 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 TBX20Q9UMR3 447 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 SIP14410 1827 aa8.68□□□□□ -1.02
GPC3-204ENST00000631057 GOLGA8IPA6NC78 632 aa8.67□□□□□ -1.02
GPC3-204ENST00000631057 GOLGA8JA6NMD2 632 aa8.67□□□□□ -1.02
GPC3-204ENST00000631057 TMEM110-MUSTN1A8MSY1 372 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms