RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SYCP1Q15431 976 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC9A9Q8IVB4 645 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 MAP4K3Q8IVH8 894 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SYCP3Q8IZU3 236 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TRAPPC12Q8WVT3 735 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC7A3Q8WY07 619 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 ZBTB10Q96DT7 871 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TMEM206Q9H813 350 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TBX20Q9UMR3 447 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 COG5Q9UP83 839 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.753e-6■■□□□ 11.9
PDLIM5-223ENST00000627587 TRIP12Q14669 1992 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TTC28Q96AY4 2481 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 DENND3A2RUS2 1198 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 CCDC169A6NNP5 214 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 BAIAP3O94812 1187 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 EDN1P05305 212 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TPM1P09493 284 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 ZNF286BP0CG31 522 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 FECHP22830 423 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 RABGGTBP53611 331 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TBC1D8BQ0IIM8 1120 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 FKBP15Q5T1M5 1219 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 DPY19L2P1Q6NXN4 242 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 PPFIBP1Q86W92 1011 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 C12orf56Q8IXR9 622 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 SCLYQ96I15 445 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 IFT74Q96LB3 600 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 ACCSQ96QU6 501 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 CBWD1Q9BRT8 395 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 C1QTNF1Q9BXJ1 281 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 KMT5AQ9NQR1 393 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 KCNG1Q9UIX4 513 aa10.38□□□□□ -0.75
PDLIM5-223ENST00000627587 TTC26A0AVF1 554 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC16A3O15427 465 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 MMP3P08254 477 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 IQCF3P0C7M6 154 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 CYP2C9P11712 490 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 ABCD1P33897 745 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 TRIM14Q14142 442 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 EXOC8Q8IYI6 725 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 CPLX3Q8WVH0 158 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 HVCN1Q96D96 273 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 TRMT13Q9NUP7 481 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 SPTLC3Q9NUV7 552 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 GBF1Q92538 1859 aa10.37□□□□□ -0.75
PDLIM5-223ENST00000627587 USP27XA6NNY8 438 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 AKR1B15C9JRZ8 316 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 H0YCG3 227 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 BMP1P13497 986 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CYP2J2P51589 502 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CAPSQ13938 189 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 E4F1Q66K89 784 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 DEFB128Q7Z7B8 93 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 PANX2Q96RD6 677 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 MKNK1Q9BUB5 465 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 AGPAT5Q9NUQ2 364 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 ERAP1Q9NZ08 941 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 LMCD1Q9NZU5 365 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CGNQ9P2M7 1197 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 ARMCX3Q9UH62 379 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 EXOC7Q9UPT5 735 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 USP20Q9Y2K6 914 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 ANK1P16157 1881 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 GAS2O43903 313 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 HBP1O60381 514 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 PPFIA4O75335 1185 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 NOL4O94818 638 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 C22orf31O95567 290 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 NAMPTP43490 491 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 SNRPFP62306 86 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 APBA1Q02410 837 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 MYBPC2Q14324 1141 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 PPP2R5AQ15172 486 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 FIGNQ5HY92 759 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 SESTD1Q86VW0 696 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 LRRC71Q8N4P6 559 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 HAPLN2Q9GZV7 340 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 PCIF1Q9H4Z3 704 aa10.36□□□□□ -0.75
PDLIM5-223ENST00000627587 ABHD10Q9NUJ1 306 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms