RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM193BQ96PV7 902 aaPredicted RBP4.65□□□□□ -1.67
VBP1-204ENST00000625964 HIST1H2AJQ99878 128 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 ANO3Q9BYT9 981 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 TMX1Q9H3N1 280 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 PRDM13Q9H4Q3 707 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 SPC25Q9HBM1 224 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 KCNG1Q9UIX4 513 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 USP18Q9UMW8 372 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 PCDHB6Q9Y5E3 794 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 PPP2R3BQ9Y5P8 575 aa4.65□□□□□ -1.67
VBP1-204ENST00000625964 MYPNQ86TC9 1320 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 SETD1BQ9UPS6 1966 aaKnown RBP4.64□□□□□ -1.67
VBP1-204ENST00000625964 PRSS38A1L453 326 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 DNAJC6O75061 913 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 VSIG10L2P0DP72 767 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 HNRNPLP14866 589 aaKnown RBP eCLIP4.64□□□□□ -1.67
VBP1-204ENST00000625964 PRR16Q569H4 304 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 IQSEC1Q6DN90 963 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 CCDC62Q6P9F0 684 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 MB21D1Q8N884 522 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 CDYL2Q8N8U2 506 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 ATL2Q8NHH9 583 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 ARL8AQ96BM9 186 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 SERHL2Q9H4I8 314 aa4.64□□□□□ -1.67
VBP1-204ENST00000625964 TOPORSQ9NS56 1045 aaPredicted RBP4.64□□□□□ -1.67
VBP1-204ENST00000625964 CENPVL1A0A0U1RR11 272 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 DAPK3O43293 454 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 JUNP05412 331 aaKnown RBP4.63□□□□□ -1.67
VBP1-204ENST00000625964 PFKMP08237 780 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 GNAT2P19087 354 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 MANFP55145 182 aaKnown RBP4.63□□□□□ -1.67
VBP1-204ENST00000625964 PPARAQ07869 468 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 METTL24Q5JXM2 366 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 APBB1IPQ7Z5R6 666 aaPredicted RBP4.63□□□□□ -1.67
VBP1-204ENST00000625964 LCORLQ8N3X6 602 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 SLC46A2Q9BY10 475 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 FAM126AQ9BYI3 521 aaPredicted RBP4.63□□□□□ -1.67
VBP1-204ENST00000625964 RSAD1Q9HA92 442 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 FRMD4BQ9Y2L6 1034 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 SBNO2Q9Y2G9 1366 aa4.63□□□□□ -1.67
VBP1-204ENST00000625964 IKBKBO14920 756 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 ZNF185O15231 689 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 SCAF4O95104 1147 aaKnown RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 EYA4O95677 639 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 KRT40Q6A162 431 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 LHFPL2Q6ZUX7 228 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 CLEC14AQ86T13 490 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 ARHGEF19Q8IW93 802 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 PLA2G15Q8NCC3 412 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 WDR66Q8TBY9 1149 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 SMG7Q92540 1137 aaKnown RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 SOX7Q9BT81 388 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 SYBUQ9NX95 663 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 NUMBLQ9Y6R0 609 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 CADPSQ9ULU8 1353 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 TMEM200CA6NKL6 621 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 GPR39O43194 453 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 TOX4O94842 621 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 FSBPO95073 299 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 TYRP1P17643 537 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 XPAP23025 273 aaPredicted RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 ZFP36P26651 326 aaKnown RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 SPIDRQ14159 915 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 PDCD1Q15116 288 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 MAN2A1Q16706 1144 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 CT83Q5H943 113 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 SPATS2Q86XZ4 545 aaKnown RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 SCARB1Q8WTV0 552 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 GAB3Q8WWW8 586 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 ANKS1AQ92625 1134 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 UIMC1Q96RL1 719 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 SPATA5L1Q9BVQ7 753 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 WNT8AQ9H1J5 351 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 C14orf93Q9H972 538 aaKnown RBP4.62□□□□□ -1.67
VBP1-204ENST00000625964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.62□□□□□ -1.67
VBP1-204ENST00000625964 MCM8Q9UJA3 840 aa4.62□□□□□ -1.67
VBP1-204ENST00000625964 NRP2O60462 931 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 LPLP06858 475 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 NRG3P56975 720 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 PITRM1Q5JRX3 1037 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 C9orf106Q8NAJ2 232 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 FAM98AQ8NCA5 519 aaKnown RBP4.61□□□□□ -1.67
VBP1-204ENST00000625964 COG1Q8WTW3 980 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 LINC00476Q8WZB0 136 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 EAF2Q96CJ1 260 aaPredicted RBP4.61□□□□□ -1.67
VBP1-204ENST00000625964 ACAP3Q96P50 834 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 OSBPL6Q9BZF3 934 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 WDR11Q9BZH6 1224 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 KCTD10Q9H3F6 313 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 PRDM12Q9H4Q4 367 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 VTA1Q9NP79 307 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 NCDNQ9UBB6 729 aa4.61□□□□□ -1.67
VBP1-204ENST00000625964 MYADML2A6NDP7 307 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 GOLGA8AA7E2F4 631 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 GAAP10253 952 aa4.6□□□□□ -1.67
VBP1-204ENST00000625964 POU3F3P20264 500 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms