RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 MCM4P33991 863 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 SNW1Q13573 536 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 NOMO2Q5JPE7 1267 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 FMR1NBQ8N0W7 255 aaPredicted RBP22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 ENGASEQ8NFI3 743 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 PGBD4Q96DM1 585 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 TMEM169Q96HH4 297 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 PYM1Q9BRP8 204 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 TBC1D13Q9NVG8 400 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 MUC6Q6W4X9 2439 aa22.01■■□□□ 1.11
R3HCC1-210ENST00000625275 MYO10Q9HD67 2058 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 NT5C1B-RDH14C9J2C7 533 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 SLC12A3P55017 1021 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 FAM160A1Q05DH4 1040 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 KCNC3Q14003 757 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 MCM6Q14566 821 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 MXD4Q14582 209 aaPredicted RBP22■■□□□ 1.11
R3HCC1-210ENST00000625275 SMC1AQ14683 1233 aaKnown RBP22■■□□□ 1.11
R3HCC1-210ENST00000625275 TMEM184AQ6ZMB5 413 aa22■■□□□ 1.11
R3HCC1-210ENST00000625275 SYT2Q8N9I0 419 aaPredicted RBP22■■□□□ 1.11
R3HCC1-210ENST00000625275 ACTN4O43707 911 aaKnown RBP21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 OFD1O75665 1012 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 DGAT1O75907 488 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 ERLIN2O94905 339 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 ZNF202O95125 648 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 SSBP05455 408 aaKnown RBP eCLIP21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 RNASELQ05823 741 aaKnown RBP21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 DHX8Q14562 1220 aaKnown RBP21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 PADI6Q6TGC4 694 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 CUEDC2Q9H467 287 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 HCN4Q9Y3Q4 1203 aa21.99■■□□□ 1.11
R3HCC1-210ENST00000625275 CNTNAP2Q9UHC6 1331 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 PRR33A8MZF0 331 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 USO1O60763 962 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 NR1I2O75469 434 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 HOXA11P31270 313 aaPredicted RBP21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 PTENP60484 403 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 TFDP1Q14186 410 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 PCBP1Q15365 356 aaKnown RBP eCLIP21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 UBXN11Q5T124 520 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 AGMOQ6ZNB7 445 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 TMEM173Q86WV6 379 aaPredicted RBP21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 URGCPQ8TCY9 931 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 RUSC1Q9BVN2 902 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 NRDE2Q9H7Z3 1164 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 SERTAD1Q9UHV2 236 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 DENND4AQ7Z401 1863 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 TRIP11Q15643 1979 aa21.98■■□□□ 1.11
R3HCC1-210ENST00000625275 C2orf71A6NGG8 1288 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 SLFN14P0C7P3 912 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 BMS1Q14692 1282 aaKnown RBP21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 RINT1Q6NUQ1 792 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 ANKRD54Q6NXT1 300 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 LLGL2Q6P1M3 1020 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 IFNLR1Q8IU57 520 aaPredicted RBP21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 RNF135Q8IUD6 432 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 MRPL43Q8N983 215 aaKnown RBP21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 RSAD1Q9HA92 442 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 KBTBD4Q9NVX7 518 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 USP25Q9UHP3 1055 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 C2orf16Q68DN1 1984 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 TRIOO75962 3097 aa21.97■■□□□ 1.11
R3HCC1-210ENST00000625275 CAPSQ13938 189 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 C1orf186Q6ZWK4 172 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 SV2BQ7L1I2 683 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 GPBP1Q86WP2 473 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 CEP57L1Q8IYX8 460 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 ASAP3Q8TDY4 903 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 SUSD6Q92537 303 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 STAMQ92783 540 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 IGSF21Q96ID5 467 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 GBP3Q9H0R5 595 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 ZBP1Q9H171 429 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 MAGEF1Q9HAY2 307 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 DNAJB4Q9UDY4 337 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 MUTYHQ9UIF7 546 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 MYH11P35749 1972 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 PLXNA3P51805 1871 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 MTCL1Q9Y4B5 1905 aaKnown RBP21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 INO80B-WBP1J3KQ70 363 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 TSPAN1O60635 241 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 GALTP07902 379 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 CYP11B2P19099 503 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 AXLP30530 894 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 CA8P35219 290 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 ARL2P36404 184 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 POU5F1BQ06416 359 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 ARSHQ5FYA8 562 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 HERC4Q5GLZ8 1057 aaPredicted RBP21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 KRBA2Q6ZNG9 492 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 VPS52Q8N1B4 723 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 CASP10Q92851 521 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 CCDC51Q96ER9 411 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 PHF7Q9BWX1 381 aaPredicted RBP21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 TNMDQ9H2S6 317 aa21.96■■□□□ 1.11
R3HCC1-210ENST00000625275 LOC730098B7Z3J9 87 aa21.95■■□□□ 1.1
R3HCC1-210ENST00000625275 B4GALT3O60512 393 aa21.95■■□□□ 1.1
R3HCC1-210ENST00000625275 HOXB8P17481 243 aaPredicted RBP21.95■■□□□ 1.1
R3HCC1-210ENST00000625275 SLC11A1P49279 550 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms