RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 TCEAL8Q8IYN2 117 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 PIK3C3Q8NEB9 887 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.53
CDKL5-207ENST00000624700 NEIL1Q96FI4 390 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-207ENST00000624700 SSBP3Q9BWW4 388 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-207ENST00000624700 RHOBTB2Q9BYZ6 727 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 PTPN22Q9Y2R2 807 aa5.47□□□□□ -1.53
CDKL5-207ENST00000624700 SUV39H1O43463 412 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 CNOT4O95628 575 aaKnown RBP5.46□□□□□ -1.54
CDKL5-207ENST00000624700 POU2F2P09086 479 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 CCT2P78371 535 aaKnown RBP5.46□□□□□ -1.54
CDKL5-207ENST00000624700 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 MINDY4Q4G0A6 757 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 HSP90AB2PQ58FF8 381 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 ABHD15Q6UXT9 468 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 MYO1HQ8N1T3 1032 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 OR14K1Q8NGZ2 314 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 ZNF480Q8WV37 535 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 INTUQ9ULD6 942 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 OAZ3Q9UMX2 235 aa5.46□□□□□ -1.54
CDKL5-207ENST00000624700 CFAP20Q9Y6A4 193 aaKnown RBP5.46□□□□□ -1.54
CDKL5-207ENST00000624700 NPEPPSL1A6NEC2 478 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 KIF3BO15066 747 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 SGTAO43765 313 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 MARCH6O60337 910 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TMEM127O75204 238 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 OFD1O75665 1012 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 PARNO95453 639 aaKnown RBP5.45□□□□□ -1.54
CDKL5-207ENST00000624700 PDCP20941 246 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 PPP3CAQ08209 521 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 HLTFQ14527 1009 aaKnown RBP eCLIP5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TBR1Q16650 682 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 LIMS2Q7Z4I7 341 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TTC7BQ86TV6 843 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 SHCBP1Q8NEM2 672 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 OR7D4Q8NG98 312 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 OR5M3Q8NGP4 307 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 NRG4Q8WWG1 115 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 RPL10LQ96L21 214 aaKnown RBP5.45□□□□□ -1.54
CDKL5-207ENST00000624700 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 CDC5LQ99459 802 aaKnown RBP5.45□□□□□ -1.54
CDKL5-207ENST00000624700 MPHOSPH9Q99550 1183 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TCF25Q9BQ70 676 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 RTFDC1Q9BY42 306 aaPredicted RBP5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 ING3Q9NXR8 418 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 GPRC5DQ9NZD1 345 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 TUBD1Q9UJT1 453 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 CLCA2Q9UQC9 943 aa5.45□□□□□ -1.54
CDKL5-207ENST00000624700 A0A1W2PRX2 142 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 SLC16A6O15403 523 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 TEX33O43247 280 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 CDC14BO60729 498 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 ZRANB2O95218 330 aaKnown RBP eCLIP5.44□□□□□ -1.54
CDKL5-207ENST00000624700 SCGB1D2O95969 90 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 IL2RBP14784 551 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 ADSLP30566 484 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-207ENST00000624700 ATP2B3Q16720 1220 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 MST1LQ2TV78 715 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 GFOD2Q3B7J2 385 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 USP45Q70EL2 814 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 ADGRE4PQ86SQ3 457 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 PRR18Q8N4B5 295 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 MAGEB6Q8N7X4 407 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 GIMAP8Q8ND71 665 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-207ENST00000624700 C1GALT1C1Q96EU7 318 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 C8orf48Q96LL4 319 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 UHRF1Q96T88 793 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-207ENST00000624700 IL23AQ9NPF7 189 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 NMRK2Q9NPI5 230 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 MAN1C1Q9NR34 630 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 MOCS1Q9NZB8 636 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-207ENST00000624700 ST6GALNAC2Q9UJ37 374 aa5.44□□□□□ -1.54
CDKL5-207ENST00000624700 CCDC154A6NI56 674 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 ERC2O15083 957 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 HTRA2O43464 458 aaPredicted RBP5.43□□□□□ -1.54
CDKL5-207ENST00000624700 ARIH2O95376 493 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 C6P13671 934 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 TACR2P21452 398 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 GZMKP49863 264 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 PTH1RQ03431 593 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 RIN1Q13671 783 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 FAM111BQ6SJ93 734 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 TAX1BP1Q86VP1 789 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 PQLC1Q8N2U9 271 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 MSL3Q8N5Y2 521 aaKnown RBP5.43□□□□□ -1.54
CDKL5-207ENST00000624700 SH3RF3Q8TEJ3 882 aaPredicted RBP5.43□□□□□ -1.54
CDKL5-207ENST00000624700 CASKIN2Q8WXE0 1202 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 CFHR4Q92496 578 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 ARL8AQ96BM9 186 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 CLIP3Q96DZ5 547 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 GPHA2Q96T91 129 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 MAP3K14Q99558 947 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 TDP1Q9NUW8 608 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 TMEM140Q9NV12 185 aa5.43□□□□□ -1.54
CDKL5-207ENST00000624700 CALCOCO1Q9P1Z2 691 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms