RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 ZRSR1Q15695 479 aaKnown RBP16.33■□□□□ 0.2
LINC00643-206ENST00000623985 DCAF4L1Q3SXM0 396 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 TMEM119Q4V9L6 283 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 C1orf186Q6ZWK4 172 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 CABP7Q86V35 215 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 DAW1Q8N136 415 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 GJD3Q8N144 294 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 ZFP42Q96MM3 310 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 KCND2Q9NZV8 630 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 TCHHQ07283 1943 aa16.33■□□□□ 0.2
LINC00643-206ENST00000623985 NRP1O14786 923 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 ALDH2P05091 517 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 LIG1P18858 919 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 AKAP5P24588 427 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 GUCY2CP25092 1073 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
LINC00643-206ENST00000623985 NPTX2P47972 431 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 PEX3P56589 373 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
LINC00643-206ENST00000623985 SF3A1Q15459 793 aaKnown RBP16.32■□□□□ 0.2
LINC00643-206ENST00000623985 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
LINC00643-206ENST00000623985 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 CASP10Q92851 521 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 CD320Q9NPF0 282 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 ARHGAP28Q9P2N2 729 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
LINC00643-206ENST00000623985 CCDC169A6NNP5 214 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 K7ERI5 159 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 NR1I2O75469 434 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 SYT1P21579 422 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 LONP1P36776 959 aaKnown RBP16.31■□□□□ 0.2
LINC00643-206ENST00000623985 OR1G1P47890 313 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 SLC12A3P55017 1021 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 RESTQ13127 1097 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 PTPN14Q15678 1187 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 ANKRD54Q6NXT1 300 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 LLGL2Q6P1M3 1020 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
LINC00643-206ENST00000623985 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 HERC2P3Q9BVR0 1158 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 TMEM134Q9H6X4 195 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 PARP2Q9UGN5 583 aa16.31■□□□□ 0.2
LINC00643-206ENST00000623985 USP15Q9Y4E8 981 aaPredicted RBP16.31■□□□□ 0.2
LINC00643-206ENST00000623985 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 CLASP2O75122 1294 aaKnown RBP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 RECQL4O94761 1208 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 CXCL14O95715 111 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 SOD2P04179 222 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 UBA7P41226 1012 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 RNF168Q8IYW5 571 aaPredicted RBP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 PLIN2Q99541 437 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 MIOSQ9NXC5 875 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 KLK14Q9P0G3 267 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 TNFSF13BQ9Y275 285 aa16.3■□□□□ 0.2
LINC00643-206ENST00000623985 PRG3Q9Y2Y8 225 aaPredicted RBP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
LINC00643-206ENST00000623985 URODP06132 367 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 PLA2G4BP0C869 781 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 TMEM87AQ8NBN3 555 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 SUSD6Q92537 303 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00643-206ENST00000623985 SNX21Q969T3 373 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 C1QTNF1Q9BXJ1 281 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 MRPL4Q9BYD3 311 aaKnown RBP16.29■□□□□ 0.2
LINC00643-206ENST00000623985 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 USP20Q9Y2K6 914 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 MYO10Q9HD67 2058 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 TSC2P49815 1807 aa16.29■□□□□ 0.2
LINC00643-206ENST00000623985 PTGESO14684 152 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 EFEMP2O95967 443 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 PLS3P13797 630 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 GRIN1Q05586 938 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 TUSC3Q13454 348 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 PTPAQ15257 358 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 ZNF568Q3ZCX4 644 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 SYCE2Q6PIF2 218 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 TAS1R3Q7RTX0 852 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 PPFIBP1Q86W92 1011 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 SPIRE2Q8WWL2 714 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
LINC00643-206ENST00000623985 NTPCRQ9BSD7 190 aaKnown RBP16.28■□□□□ 0.2
LINC00643-206ENST00000623985 COLEC11Q9BWP8 271 aa16.28■□□□□ 0.2
LINC00643-206ENST00000623985 EMILIN2Q9BXX0 1053 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms