RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 TFR2Q9UP52 801 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 SPATA31A3Q5VYP0 1347 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CDHR2Q9BYE9 1310 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 POTEB3A0JP26 581 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 POTECB2RU33 542 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CYP2C19P33261 490 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 ATP2C1P98194 919 aaPredicted RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 POTEBQ6S5H4 581 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 RASSF3Q86WH2 238 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CCT8L2Q96SF2 557 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CHCHD3Q9NX63 227 aaKnown RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 EHD2Q9NZN4 543 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 ARHGAP26Q9UNA1 814 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 MINPP1Q9UNW1 487 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 AGTP01019 485 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CYP19A1P11511 503 aaPredicted RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 CATSPER4Q7RTX7 472 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 RMDN2Q96LZ7 410 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 LMCD1Q9NZU5 365 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 OSBPP22059 807 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 TRIM72Q6ZMU5 477 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 DCAF4Q8WV16 495 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 FAM213AQ9BRX8 229 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 INTS2Q9H0H0 1204 aaKnown RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 TOPORSQ9NS56 1045 aaPredicted RBP15.8■□□□□ 0.12
C9orf139-202ENST00000623196 TBC1D22BQ9NU19 505 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 TRAF3IP3Q9Y228 551 aa15.8■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L5A8MUK1 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 FOXP2O15409 715 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 HNRNPCP07910 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 MYBL1P10243 752 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 HIC1Q14526 733 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 REXO1L1PQ8IX06 675 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 CATSPER1Q8NEC5 780 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 PPP1R12AO14974 1030 aaPredicted RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 PSMC1P62191 440 aaKnown RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 NSUN2Q08J23 767 aaKnown RBP eCLIP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 MTMR1Q13613 665 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 MAPRE2Q15555 327 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 USP17L6PQ6QN14 398 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 SEPT8Q92599 483 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 LRFN2Q9ULH4 789 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 STAP1Q9ULZ2 295 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 TCP11X1B4DZS4 312 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 BNIP3LO60238 219 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 IMPG1Q17R60 797 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 LRRN4CLQ8ND94 238 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 C1orf54Q8WWF1 131 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 SH3GL3Q99963 347 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 SLC16A4O15374 487 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 CDH16O75309 829 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 APOA1P02647 267 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 ASNSP08243 561 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 ZC3H12BQ5HYM0 836 aaKnown RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 MTBPQ96DY7 904 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 PPP1R16BQ96T49 567 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
C9orf139-202ENST00000623196 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.79■□□□□ 0.12
C9orf139-202ENST00000623196 BAG6P46379 1132 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 KCNB1Q14721 858 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 GFM2Q969S9 779 aaKnown RBP15.78■□□□□ 0.12
C9orf139-202ENST00000623196 DENND3A2RUS2 1198 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 IL10P22301 178 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 GNA15P30679 374 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 DPYDQ12882 1025 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 BRINP3Q76B58 766 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 ATL2Q8NHH9 583 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 FAM167AQ96KS9 214 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 TEX12Q9BXU0 123 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 ZNF711Q9Y462 761 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 EIF3HO15372 352 aaKnown RBP eCLIP15.78■□□□□ 0.12
C9orf139-202ENST00000623196 MARK3P27448 753 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 KRT76Q01546 638 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 AP1B1Q10567 949 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 SMG5Q9UPR3 1016 aaKnown RBP15.78■□□□□ 0.12
C9orf139-202ENST00000623196 GH2P01242 217 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 ROR1Q01973 937 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 EP400NLQ6ZTU2 488 aa15.78■□□□□ 0.12
C9orf139-202ENST00000623196 ZNF473Q8WTR7 871 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms