RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RABGGTAQ92696 567 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 B3GALT6Q96L58 329 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 GAD1Q99259 594 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 ADAM7Q9H2U9 754 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 PRG3Q9Y2Y8 225 aaPredicted RBP12.73□□□□□ -0.37
CPNE3-210ENST00000621245 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
CPNE3-210ENST00000621245 MYH11P35749 1972 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 PDCD11Q14690 1871 aaKnown RBP12.72□□□□□ -0.37
CPNE3-210ENST00000621245 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 C2CD2LO14523 706 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 BAG4O95429 457 aaKnown RBP12.72□□□□□ -0.37
CPNE3-210ENST00000621245 EFEMP2O95967 443 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
CPNE3-210ENST00000621245 SRGAP2BP0DMP2 458 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 HOXB8P17481 243 aaPredicted RBP12.72□□□□□ -0.37
CPNE3-210ENST00000621245 AKAP5P24588 427 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 PTGDRQ13258 359 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 TMC5Q6UXY8 1006 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 OTUD6AQ7L8S5 288 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 PGBD4Q96DM1 585 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 KLHL5Q96PQ7 755 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 KIF2CQ99661 725 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 ZMYND15Q9H091 742 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 ANKEF1Q9NU02 776 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
CPNE3-210ENST00000621245 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 GAS2O43903 313 aaKnown RBP12.71□□□□□ -0.37
CPNE3-210ENST00000621245 ERLIN2O94905 339 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 NPTXRO95502 500 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 BRD1O95696 1058 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 ITGA4P13612 1032 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 CLCN4P51793 760 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 DSC1Q08554 894 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 ECM1Q16610 540 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 BMP8AQ7Z5Y6 402 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 CATSPER3Q86XQ3 398 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 RNF168Q8IYW5 571 aaPredicted RBP12.71□□□□□ -0.37
CPNE3-210ENST00000621245 KREMEN2Q8NCW0 462 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 GSTCDQ8NEC7 633 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 PBXIP1Q96AQ6 731 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 PAAF1Q9BRP4 392 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
CPNE3-210ENST00000621245 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 DCHS1Q96JQ0 3298 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
CPNE3-210ENST00000621245 INPPL1O15357 1258 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 ASAP2O43150 1006 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 DGAT1O75907 488 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 IGFBP6P24592 240 aaPredicted RBP12.7□□□□□ -0.38
CPNE3-210ENST00000621245 OR1G1P47890 313 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 TCF15Q12870 199 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 ZNF174Q15697 407 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 MFSD14AQ96MC6 490 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 TMEM175Q9BSA9 504 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 HERC2P3Q9BVR0 1158 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 CITO14578 2027 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 NOTCH4Q99466 2003 aa12.7□□□□□ -0.38
CPNE3-210ENST00000621245 LRRIQ4A6NIV6 560 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
CPNE3-210ENST00000621245 SOD2P04179 222 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 MRE11P49959 708 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 ITIH3Q06033 890 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 TRIM29Q14134 588 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 MXD4Q14582 209 aaPredicted RBP12.69□□□□□ -0.38
CPNE3-210ENST00000621245 CES5AQ6NT32 575 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 FBXL6Q8N531 539 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 PTCD2Q8WV60 388 aaKnown RBP12.69□□□□□ -0.38
CPNE3-210ENST00000621245 KIFC3Q9BVG8 833 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 DZANK1Q9NVP4 752 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
CPNE3-210ENST00000621245 TEX28O15482 410 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 RFPL2O75678 378 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 ALDH2P05091 517 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 SPATA31D3P0C874 917 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 KLRC2P26717 231 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 MTHFRP42898 656 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 TFDP1Q14186 410 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 EEF1DP3Q658K8 133 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-210ENST00000621245 SPATA31D4Q6ZUB0 917 aa12.68□□□□□ -0.38
CPNE3-210ENST00000621245 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms