RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CYP2B6P20813 491 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 SOX5P35711 763 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 KCNJ1P48048 391 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 DYNLT1P63172 113 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 DR1Q01658 176 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 TRADDQ15628 312 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 CCL15Q16663 113 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 PAPD7Q5XG87 772 aaKnown RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 FBXO16Q8IX29 292 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 ARHGAP24Q8N264 748 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 CCDC197Q8NCU1 140 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 RAB3IL1Q8TBN0 382 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 CCHCR1Q8TD31 782 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 WDR18Q9BV38 432 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 RAB17Q9H0T7 212 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 TMEM206Q9H813 350 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 PSD3Q9NYI0 1048 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 AGTPBP1Q9UPW5 1226 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 SYNJ2BP-COX16A0A087WUM0 186 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 A0A1W2PQJ5 194 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 C19orf81C9J6K1 198 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 FOXN3O00409 490 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 MAPK4P31152 587 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 JAK3P52333 1124 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 POLE2P56282 527 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 TMEM119Q4V9L6 283 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 GJC2Q5T442 439 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 EMBQ6PCB8 327 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 ANKRD13AQ8IZ07 590 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 SPDL1Q96EA4 605 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 ZIM3Q96PE6 472 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 ATP6V0A4Q9HBG4 840 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 COX16Q9P0S2 106 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 FBXL5Q9UKA1 691 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 IKBKGQ9Y6K9 419 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
GGA3-222ENST00000621217 SPEF2Q9C093 1822 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 MYH6P13533 1939 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 MYH8P13535 1937 aa9.72□□□□□ -0.85
GGA3-222ENST00000621217 MYO1FO00160 1098 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 CLDN3O15551 220 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 SLITRK3O94933 977 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 FAM153BP0C7A2 387 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 ITGA4P13612 1032 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 NSFP46459 744 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 NAB2Q15742 525 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 FAM153CQ494X1 144 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 C7orf31Q8N865 590 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 MKL1Q969V6 931 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 IQCGQ9H095 443 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 KLHL11Q9NVR0 708 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 NOL3O60936 208 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 SEC24CP53992 1094 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 YARSP54577 528 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 MFAP3P55082 362 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 ARSHQ5FYA8 562 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 C1orf54Q8WWF1 131 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 OPTNQ96CV9 577 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 THOC1Q96FV9 657 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 WNK4Q96J92 1243 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 FMO2Q99518 471 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 THAP2Q9H0W7 228 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 AGPAT3Q9NRZ7 376 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 ADARB2Q9NS39 739 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.85
GGA3-222ENST00000621217 ANAPC7Q9UJX3 599 aa9.71□□□□□ -0.85
GGA3-222ENST00000621217 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.71□□□□□ -0.85
GGA3-222ENST00000621217 ZNF233A6NK53 670 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 ACTR2P61160 394 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 MEA1Q16626 185 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 EDRF1Q3B7T1 1238 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 CREG2Q8IUH2 290 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 SLC20A1Q8WUM9 679 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 PBKQ96KB5 322 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 C11orf70Q9BRQ4 267 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 TOPORSQ9NS56 1045 aaPredicted RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 LTBP4Q8N2S1 1624 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 THAP12O43422 761 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 ITGB5P18084 799 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 ACTN3Q08043 901 aaPredicted RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 BFSP1Q12934 665 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 TAF11Q15544 211 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 LY6KQ17RY6 165 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 OTOP1Q7RTM1 612 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 VPS52Q8N1B4 723 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 RBM46Q8TBY0 533 aaKnown RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 TRAPPC12Q8WVT3 735 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 RNPC3Q96LT9 517 aaKnown RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 CFAP57Q96MR6 1250 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 YIPF3Q9GZM5 350 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 KIAA1683Q9H0B3 1180 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 A1CFQ9NQ94 594 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms