RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 B4GALNT2Q8NHY0 566 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 COG1Q8WTW3 980 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM227BQ96M60 508 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SAYSD1Q9NPB0 183 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DISC1Q9NRI5 854 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SYNJ2BP-COX16A0A087WUM0 186 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ASNA1O43681 348 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 PPP1R37O75864 691 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ACSL3O95573 720 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ACTN3Q08043 901 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 BBS9Q3SYG4 887 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ATAD3BQ5T9A4 648 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 KRT73Q86Y46 540 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF654Q8IZM8 581 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CCNYQ8ND76 341 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 SCFD1Q8WVM8 642 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 IRF2BPLQ9H1B7 796 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 KRCC1Q9NPI7 259 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 GINM1Q9NU53 330 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 COX16Q9P0S2 106 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ENC1O14682 589 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 SPAG6O75602 509 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CAPN1P07384 714 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 IMPDH2P12268 514 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CREB1P16220 341 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ATP5JP18859 108 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CYP2C19P33261 490 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 NDUFA8P51970 172 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 PLA2G4DQ86XP0 818 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 VPS50Q96JG6 964 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 AGBL1Q96MI9 1066 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 APOL4Q9BPW4 351 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 FAM192AQ9GZU8 254 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 GTSE1Q9NYZ3 720 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 GCNT4Q9P109 453 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 PNMA3Q9UL41 463 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CENPXA8MT69 81 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 GYG1P46976 350 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ANKS3Q6ZW76 656 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 LPIN2Q92539 896 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ULK4Q96C45 1275 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 XDHP47989 1333 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 NPC1L1Q9UHC9 1359 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 TRIM13O60858 407 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 BBOX1O75936 387 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 NAALADL2Q58DX5 795 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ELMOD1Q8N336 334 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 GPT2Q8TD30 523 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 FAF2Q96CS3 445 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 WNT8AQ9H1J5 351 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 BRAFP15056 766 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 IL12RB1P42701 662 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 SERPINH1P50454 418 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 KBTBD12Q3ZCT8 623 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 KRT74Q7RTS7 529 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 NACC1Q96RE7 527 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ZSCAN10Q96SZ4 725 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 WDR11Q9BZH6 1224 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 H2AFY2Q9P0M6 372 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 MFAP3LO75121 409 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CLASP2O75122 1294 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 VEGFAP15692 232 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 MDH1P40925 334 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 RECQLP46063 649 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 CTTNQ14247 550 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 AARS2Q5JTZ9 985 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF467Q7Z7K2 595 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ZFYVE19Q96K21 471 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ZFRQ96KR1 1074 aaKnown RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 USP28Q96RU2 1077 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
COLCA1-205ENST00000620864 PSTPIP2Q9H939 334 aa7.57□□□□□ -1.2
COLCA1-205ENST00000620864 ENO4A6NNW6 628 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PSMD3O43242 534 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 FGGP02679 453 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 EPHB1P54762 984 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 HDLBPQ00341 1268 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ORC2Q13416 577 aaPredicted RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ME3Q16798 604 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TBC1D19Q8N5T2 526 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ATP8B4Q8TF62 1192 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PIGBQ92521 554 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 KLHL25Q9H0H3 589 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 NCOA5Q9HCD5 579 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 CEP72Q9P209 647 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 WDR91A4D1P6 747 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ZSCAN9O15535 394 aaPredicted RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 H2AFYO75367 372 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TSPAN9O75954 239 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 POLR2MP0CAP2 368 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 SERPINB9P50453 376 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 HIF1AQ16665 826 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms