RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, human

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-213	ENST00000619396	RNF207	Q6ZRF8	634 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	PRELID2	Q8N945	189 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	ZSWIM2	Q8NEG5	633 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	RPS6KC1	Q96S38	1066 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	ZSWIM1	Q9BR11	485 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	DBR1	Q9UK59	544 aa	Known RBP	32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	USP20	Q9Y2K6	914 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	PHF2	O75151	1096 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	RTN2	O75298	545 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	CHRNB2	P17787	502 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	MARCKSL1	P49006	195 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	PEX5	P50542	639 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	PPARD	Q03181	441 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	FBXW10	Q5XX13	1052 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	ICE2	Q659A1	982 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	SUGP1	Q8IWZ8	645 aa	Known RBP	32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	ZDHHC14	Q8IZN3	488 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	CNPY4	Q8N129	248 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	CAPN7	Q9Y6W3	813 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	PARP14	Q460N5	1801 aa		32.34	■■■□□ 2.77
KHSRP-213	ENST00000619396	SYNGAP1	Q96PV0	1343 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	COL11A1	P12107	1806 aa	Predicted RBP	32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	NUDT17	P0C025	328 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	PLS3	P13797	630 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	QARS	P47897	775 aa	Known RBP	32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	UBL4B	Q8N7F7	174 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	RAPGEF5	Q92565	580 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	KAT5	Q92993	513 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	PDCD2L	Q9BRP1	358 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	GPRC5C	Q9NQ84	441 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	PXMP2	Q9NR77	195 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	HSPBP1	Q9NZL4	362 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	SNX24	Q9Y343	169 aa		32.33	■■■□□ 2.77
KHSRP-213	ENST00000619396	TESPA1	A2RU30	521 aa	Predicted RBP	32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	ZBED4	O75132	1171 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	MTA2	O94776	668 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	HSPA6	P17066	643 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	CTNNA2	P26232	953 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	XXYLT1	Q8NBI6	393 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	C18orf8	Q96DM3	657 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	GRHL1	Q9NZI5	618 aa		32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	NOCT	Q9UK39	431 aa	Known RBP	32.32	■■■□□ 2.77
KHSRP-213	ENST00000619396	MAPK13	O15264	365 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	SGPL1	O95470	568 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	CCNE2	O96020	404 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	CHRNA3	P32297	505 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	MCCD1	P59942	119 aa	Predicted RBP	32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	WRNIP1	Q96S55	665 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	PABPC3	Q9H361	631 aa	Known RBP	32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	PCYOX1	Q9UHG3	505 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	DDX20	Q9UHI6	824 aa	Known RBP	32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	DOCK1	Q14185	1865 aa		32.32	■■■□□ 2.76
KHSRP-213	ENST00000619396	PMM2	O15305	246 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	SHBG	P04278	402 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	YWHAB	P31946	246 aa	Known RBP	32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	PMS2	P54278	862 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	IFFO1	Q0D2I5	559 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	IFT88	Q13099	833 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	BAAT	Q14032	418 aa	Predicted RBP	32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	ZNF746	Q6NUN9	644 aa	Predicted RBP	32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	FAM71A	Q8IYT1	594 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	ZNF541	Q9H0D2	1346 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	C5orf60	A6NFR6	353 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	BACH1	O14867	736 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	COMT	P21964	271 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	PLTP	P55058	493 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	BACE1	P56817	501 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	GTF2B	Q00403	316 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	QPCT	Q16769	361 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	ARHGEF16	Q5VV41	709 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	PLA2G4F	Q68DD2	849 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	CD101	Q93033	1021 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	RNF146	Q9NTX7	359 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	RASAL2	Q9UJF2	1139 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	PCDHA3	Q9Y5H8	950 aa		32.31	■■■□□ 2.76
KHSRP-213	ENST00000619396	CAND2	O75155	1236 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	HNRNPH1	P31943	449 aa	Known RBP	32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	ANGEL2	Q5VTE6	544 aa	Known RBP	32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	NOP9	Q86U38	636 aa	Known RBP	32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	FBXO25	Q8TCJ0	367 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	EPS8L1	Q8TE68	723 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	RNF25	Q96BH1	459 aa	Predicted RBP	32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	TMEM117	Q9H0C3	514 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	ST6GALNAC4	Q9H4F1	302 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	GZMA	P12544	262 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	HMGCS2	P54868	508 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	TTC27	Q6P3X3	843 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	KCNV1	Q6PIU1	500 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	SCYL3	Q8IZE3	742 aa		32.3	■■■□□ 2.76
KHSRP-213	ENST00000619396	TMEM110-MUSTN1	A8MSY1	372 aa		32.29	■■■□□ 2.76
KHSRP-213	ENST00000619396	PTPRA	P18433	802 aa		32.29	■■■□□ 2.76
KHSRP-213	ENST00000619396	HAUS6	Q7Z4H7	955 aa		32.29	■■■□□ 2.76
KHSRP-213	ENST00000619396	KREMEN1	Q96MU8	473 aa		32.29	■■■□□ 2.76
KHSRP-213	ENST00000619396	CHORDC1	Q9UHD1	332 aa	Predicted RBP	32.29	■■■□□ 2.76
KHSRP-213	ENST00000619396	FZD9	O00144	591 aa		32.28	■■■□□ 2.76
KHSRP-213	ENST00000619396	LYPLA2	O95372	231 aa		32.28	■■■□□ 2.76
KHSRP-213	ENST00000619396	GGPS1	O95749	300 aa		32.28	■■■□□ 2.76
KHSRP-213	ENST00000619396	MESD	Q14696	234 aa		32.28	■■■□□ 2.76
KHSRP-213	ENST00000619396	MORC4	Q8TE76	937 aa		32.28	■■■□□ 2.76
KHSRP-213	ENST00000619396	CNOT10	Q9H9A5	744 aa	Known RBP	32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms