RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-206ENST00000619300 LAMC2Q13753 1193 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 MXD4Q14582 209 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-206ENST00000619300 PSMD6Q15008 389 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-206ENST00000619300 RPGRIP1Q96KN7 1286 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 TLR10Q9BXR5 811 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 HAPLN2Q9GZV7 340 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 VTA1Q9NP79 307 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 TSKSQ9UJT2 592 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 A0A0B4J269 797 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 MFAP3P55082 362 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 ZNF467Q7Z7K2 595 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-206ENST00000619300 CREG2Q8IUH2 290 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 TAS1R2Q8TE23 839 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 OSBPL9Q96SU4 736 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 PTPN18Q99952 460 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 JPH2Q9BR39 696 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-206ENST00000619300 HYOU1Q9Y4L1 999 aa20.6■□□□□ 0.89
PSPC1-206ENST00000619300 HBP1O60381 514 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 LDHAP00338 332 aaKnown RBP20.59■□□□□ 0.89
PSPC1-206ENST00000619300 ACOT2P49753 483 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 NLRP11P59045 1033 aaKnown RBP20.59■□□□□ 0.89
PSPC1-206ENST00000619300 ARHGAP1Q07960 439 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 LAMTOR4Q0VGL1 99 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 IFI16Q16666 785 aaKnown RBP20.59■□□□□ 0.89
PSPC1-206ENST00000619300 DNAAF5Q86Y56 855 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 PPM1KQ8N3J5 372 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 KAT5Q92993 513 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 KREMEN1Q96MU8 473 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 PARK7Q99497 189 aaKnown RBP20.59■□□□□ 0.89
PSPC1-206ENST00000619300 ANKZF1Q9H8Y5 726 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 TRPC6Q9Y210 931 aa20.59■□□□□ 0.89
PSPC1-206ENST00000619300 RBM47A0AV96 593 aaKnown RBP20.58■□□□□ 0.89
PSPC1-206ENST00000619300 NCK2O43639 380 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 PRPF4BQ13523 1007 aaKnown RBP20.58■□□□□ 0.89
PSPC1-206ENST00000619300 NFRKBQ6P4R8 1299 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 CRELD2Q6UXH1 353 aaPredicted RBP20.58■□□□□ 0.89
PSPC1-206ENST00000619300 FAM71AQ8IYT1 594 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 NOA1Q8NC60 698 aaKnown RBP20.58■□□□□ 0.89
PSPC1-206ENST00000619300 CAGE1Q8TC20 777 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 HELQQ8TDG4 1101 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 COG1Q8WTW3 980 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 ZNF516Q92618 1163 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 NT5C1BQ96P26 610 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 FNBP1Q96RU3 617 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 AGPAT1Q99943 283 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 MSTO1Q9BUK6 570 aa20.58■□□□□ 0.89
PSPC1-206ENST00000619300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.899e-7■■■■■ 78
PSPC1-206ENST00000619300 A0A0A6YYK5 440 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-206ENST00000619300 GRID2IPA4D2P6 1211 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 PDE2AO00408 941 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-206ENST00000619300 EDN1P05305 212 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 GALCP54803 685 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 CDCA2Q69YH5 1023 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-206ENST00000619300 ZPBP2Q6X784 338 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 C15orf39Q6ZRI6 1047 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 GPR142Q7Z601 462 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 LRRC71Q8N4P6 559 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 MSANTD4Q8NCY6 345 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 CCDC94Q9BW85 323 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-206ENST00000619300 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.58■□□□□ 0.88
PSPC1-206ENST00000619300 ERAP1Q9NZ08 941 aa20.58■□□□□ 0.88
PSPC1-206ENST00000619300 GH1P01241 217 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 MATR3P43243 847 aaKnown RBP eCLIP20.57■□□□□ 0.88
PSPC1-206ENST00000619300 NOP2P46087 812 aaKnown RBP20.57■□□□□ 0.88
PSPC1-206ENST00000619300 MAMDC4Q6UXC1 1216 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 SHC3Q92529 594 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 CCDC113Q9H0I3 377 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 ZNF446Q9NWS9 450 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 ANKFY1Q9P2R3 1169 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 SUCLA2Q9P2R7 463 aaPredicted RBP20.57■□□□□ 0.88
PSPC1-206ENST00000619300 ADGRA2Q96PE1 1338 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 MCM3APO60318 1980 aa20.57■□□□□ 0.88
PSPC1-206ENST00000619300 MSCO60682 206 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 USP8P40818 1118 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 MEI1Q5TIA1 1274 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 RNF149Q8NC42 400 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
PSPC1-206ENST00000619300 RNPEPQ9H4A4 650 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 ZC3H11AO75152 810 aaKnown RBP eCLIP20.56■□□□□ 0.88
PSPC1-206ENST00000619300 SNAI1O95863 264 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-206ENST00000619300 FTCDO95954 541 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 TNNI1P19237 187 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 GRB14Q14449 540 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 FAM110CQ1W6H9 321 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 GJC2Q5T442 439 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-206ENST00000619300 TMCO3Q6UWJ1 677 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 ZBTB8OSQ8IWT0 167 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 SLC20A1Q8WUM9 679 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 TRAPPC12Q8WVT3 735 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 C2orf40Q9H1Z8 148 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 PDE11AQ9HCR9 933 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 RBAKQ9NYW8 714 aaPredicted RBP20.56■□□□□ 0.88
PSPC1-206ENST00000619300 MYH10P35580 1976 aa20.56■□□□□ 0.88
PSPC1-206ENST00000619300 TMCO5BA8MYB1 307 aa20.55■□□□□ 0.88
PSPC1-206ENST00000619300 CLDN3O15551 220 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms