RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 DYDC2Q96IM9 177 aa10.2□□□□□ -0.78
SYN3-213ENST00000619146 PLIN2Q99541 437 aa10.2□□□□□ -0.78
SYN3-213ENST00000619146 CDCA3Q99618 268 aaPredicted RBP10.2□□□□□ -0.78
SYN3-213ENST00000619146 ATP6V0A4Q9HBG4 840 aa10.2□□□□□ -0.78
SYN3-213ENST00000619146 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
SYN3-213ENST00000619146 KBTBD4Q9NVX7 518 aa10.2□□□□□ -0.78
SYN3-213ENST00000619146 HCFC2Q9Y5Z7 792 aa10.2□□□□□ -0.78
SYN3-213ENST00000619146 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 CHD8Q9HCK8 2581 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 IGKV6D-21A0A0A0MT36 114 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 C9IYK1 514 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 PLA2G4BP0C869 781 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 MYBP10242 640 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 LAG3P18627 525 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 STAT5BP51692 787 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 ECM1Q16610 540 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 ZSCAN23Q3MJ62 389 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 CWF19L1Q69YN2 538 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 SWSAP1Q6NVH7 229 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 CNNM4Q6P4Q7 775 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 RBM43Q6ZSC3 357 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 OTUD6AQ7L8S5 288 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 KIAA2013Q8IYS2 634 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 SYT2Q8N9I0 419 aaPredicted RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 CCDC47Q96A33 483 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 GTPBP4Q9BZE4 634 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 GZF1Q9H116 711 aaPredicted RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 ZNF302Q9NR11 478 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 RGS18Q9NS28 235 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 ANKEF1Q9NU02 776 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 BLOC1S4Q9NUP1 217 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 KCND2Q9NZV8 630 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 KIAA1468Q9P260 1216 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
SYN3-213ENST00000619146 PUF60Q9UHX1 559 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 DBR1Q9UK59 544 aaKnown RBP10.19□□□□□ -0.78
SYN3-213ENST00000619146 ACACBO00763 2458 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 SMIM35A0A1B0GVV1 85 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 ARHGEF35A5YM69 484 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 STK25O00506 426 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 CLASP2O75122 1294 aaKnown RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 SSBP05455 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
SYN3-213ENST00000619146 EPCAMP16422 314 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 FGFR4P22455 802 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 YWHABP31946 246 aaKnown RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 AFMP43652 599 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 XKR3Q5GH77 459 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 SASS6Q6UVJ0 657 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 TMC5Q6UXY8 1006 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 TMEM184AQ6ZMB5 413 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 SLC24A5Q71RS6 500 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 PLPPR4Q7Z2D5 763 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 ERMP1Q7Z2K6 904 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 KCNK18Q7Z418 384 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 KIAA0319LQ8IZA0 1049 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 METTL13Q8N6R0 699 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 TDRD5Q8NAT2 981 aaKnown RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 ST13P5Q8NFI4 369 aaPredicted RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 RIN2Q8WYP3 895 aaPredicted RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 CASP10Q92851 521 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 SMARCE1Q969G3 411 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 RMDN1Q96DB5 314 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 CCDC43Q96MW1 224 aaKnown RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 ZNF558Q96NG5 402 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 CASD1Q96PB1 797 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 GSDMAQ96QA5 445 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 C7orf25Q9BPX7 421 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 BHMT2Q9H2M3 363 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 NRBP2Q9NSY0 501 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 RNF19AQ9NV58 838 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 RMND1Q9NWS8 449 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 PPME1Q9Y570 386 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
SYN3-213ENST00000619146 SQORQ9Y6N5 450 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 R4GN57 208 aa10.18□□□□□ -0.78
SYN3-213ENST00000619146 C2orf71A6NGG8 1288 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 SPDYE4A6NLX3 237 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 E9PMD0 336 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 KRT37O76014 449 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 CXCL14O95715 111 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 CCDC192P0DO97 292 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 HOXB8P17481 243 aaPredicted RBP10.17□□□□□ -0.78
SYN3-213ENST00000619146 SLC12A3P55017 1021 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 ZNF445P59923 1031 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 PRKCEQ02156 737 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 KRT17Q04695 432 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 MCM6Q14566 821 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 SMC1AQ14683 1233 aaKnown RBP10.17□□□□□ -0.78
SYN3-213ENST00000619146 ANGPT1Q15389 498 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 UGCGQ16739 394 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 NT5DC1Q5TFE4 455 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 PDE12Q6L8Q7 609 aaKnown RBP10.17□□□□□ -0.78
SYN3-213ENST00000619146 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
SYN3-213ENST00000619146 CKAP2LQ8IYA6 745 aa10.17□□□□□ -0.78
SYN3-213ENST00000619146 ABI1Q8IZP0 508 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms